RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 HAND1O96004 215 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 PGA4P0DJD7 388 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 PGA3P0DJD8 388 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 GPX2P18283 190 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 PPIFP30405 207 aaKnown RBP5.54□□□□□ -1.52
HDAC3-209ENST00000486618 OR3A4PP47883 348 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 PROK1P58294 105 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 KRTAP10-3P60369 221 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 MFGE8Q08431 387 aaPredicted RBP5.54□□□□□ -1.52
HDAC3-209ENST00000486618 EDDM3AQ14507 147 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM97Q5BJF2 176 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 CRIP3Q6Q6R5 217 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 ATRAIDQ6UW56 229 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 PQLC2Q6ZP29 291 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 Q6ZPA2 131 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 NOXA1Q86UR1 476 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF101Q8IZC7 436 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 OR2Z1Q8NG97 314 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 OR4P4Q8NGL7 312 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 TRUB1Q8WWH5 349 aaKnown RBP5.54□□□□□ -1.52
HDAC3-209ENST00000486618 TEX37Q96LM6 180 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 APOL4Q9BPW4 351 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 ABHD14AQ9BUJ0 271 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 PECRQ9BY49 303 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 IL36GQ9NZH8 169 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF107Q9UII5 783 aaPredicted RBP5.54□□□□□ -1.52
HDAC3-209ENST00000486618 ING4Q9UNL4 249 aa5.54□□□□□ -1.52
HDAC3-209ENST00000486618 CENPVL3A0A0U1RRI6 287 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 ANKRD20A5PA0PJZ0 165 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 GMNCA6NCL1 334 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 LEUTXA8MZ59 168 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 G3V4G9 280 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM178BH3BS89 294 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 TNFRSF13BO14836 293 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-209ENST00000486618 GPR137BO60478 399 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 ATG12O94817 140 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 OR13C7P0DN81 318 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF32P17041 273 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 PRKACGP22612 351 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 IL12AP29459 219 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 GGT2P36268 569 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 GLIPR1P48060 266 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 CDH12P55289 794 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 TCL1AP56279 114 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 FGF12P61328 243 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 RRAS2P62070 204 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-209ENST00000486618 EMX1Q04741 257 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-209ENST00000486618 OR2F1Q13607 317 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 RGNQ15493 299 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF74Q16587 644 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 HIST3H3Q16695 136 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 SPRNQ5BIV9 151 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 TMEM128Q5BJH2 165 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 VAX1Q5SQQ9 334 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 KPRPQ5T749 579 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-209ENST00000486618 SFRP4Q6FHJ7 346 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-209ENST00000486618 GDPGP1Q6ZNW5 385 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 MAVSQ7Z434 540 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 IQCF1Q8N6M8 205 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF383Q8NA42 475 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 GJC3Q8NFK1 279 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 DMBX1Q8NFW5 382 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 OR8B3Q8NGG8 313 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 OR13C6PQ8NH95 151 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 TERB2Q8NHR7 220 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 AENQ8WTP8 325 aaKnown RBP5.53□□□□□ -1.52
HDAC3-209ENST00000486618 ITLN1Q8WWA0 313 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 HPSE2Q8WWQ2 592 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 C4orf45Q96LM5 186 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 OR8B2Q96RD0 313 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 ZNF347Q96SE7 839 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 S1PR3Q99500 378 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 HCAR1Q9BXC0 346 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 AMBNQ9NP70 447 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 TAS2R5Q9NYW4 299 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 JPT1Q9UK76 154 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 SSR3Q9UNL2 185 aa5.53□□□□□ -1.52
HDAC3-209ENST00000486618 TINCRA0A1B0GVN0 87 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 C20orf202A1L168 122 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 OR5H14A6NHG9 310 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 EI24O14681 340 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 TYROBPO43914 113 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 SNX3O60493 162 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 FSTL3O95633 263 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 IGF1P05019 195 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 H2BFMP0C1H6 154 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 LIMS3P0CW19 117 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 LIMS4P0CW20 117 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 ARSBP15848 533 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 MGMTP16455 207 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 ZNF133P52736 654 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-209ENST00000486618 DLX6P56179 175 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 PCBD1P61457 104 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 PPP3R1P63098 170 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 CDK6Q00534 326 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 PSG4Q00888 419 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 PSG7Q13046 419 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 DMRTC1Q5HYR2 192 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 OR10J3Q5JRS4 329 aa5.52□□□□□ -1.53
HDAC3-209ENST00000486618 TMEM255AQ5JRV8 349 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms