RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 MDKP21741 143 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-228ENST00000486227 G6PCP35575 357 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 KIR2DS2P43631 304 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 VWA1Q6PCB0 445 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 SPNS3Q6ZMD2 512 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 Q6ZT83 130 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 BET1LQ9NYM9 111 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 PINLYPA6NC86 204 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 SH2D7A6NKC9 451 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-228ENST00000486227 MMP9P14780 707 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 HIST1H1BP16401 226 aaKnown RBP9.43□□□□□ -0.9
HDAC6-228ENST00000486227 ABLIM2Q6H8Q1 611 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 BIVMQ86UB2 503 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 TGIF2LYQ8IUE0 185 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 OR52L2PQ8NGH6 319 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 OR2T6Q8NHC8 308 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 RARRES2Q99969 163 aa9.43□□□□□ -0.9
HDAC6-228ENST00000486227 FCN1O00602 326 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FHITP49789 147 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 CNN1P51911 297 aaKnown RBP9.42□□□□□ -0.9
HDAC6-228ENST00000486227 PLAC9Q5JTB6 97 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 COL5A1-AS1Q5SY13 56 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 C16orf82Q7Z2V1 217 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 ABHD14BQ96IU4 210 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 TBX15Q96SF7 602 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 CCL13Q99616 98 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 RNF126Q9BV68 326 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 RSPO3Q9BXY4 272 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-228ENST00000486227 PKIBQ9C010 78 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 SLC25A10Q9UBX3 287 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-228ENST00000486227 ZDHHC8Q9ULC8 765 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 hCG_38984A0A1B0GV85 526 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 IFNL4K9M1U5 179 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 NEURL1O76050 574 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 CLDN14O95500 239 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 HBZP02008 142 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 ERVFC1-1P60608 527 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 SPCS3P61009 180 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 RUNX1Q01196 453 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 Q56UQ5 140 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM57AQ8TBR7 257 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 TMEM147Q9BVK8 224 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 SEBOXQ9HB31 216 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-228ENST00000486227 CLDN16Q9Y5I7 305 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 INSIG2Q9Y5U4 225 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 PLXNA4Q9HCM2 1894 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 ZFHX2Q9C0A1 2572 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A10PA6NDY2 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A18PA6NE21 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A16PA6NEW6 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A20PA6NIJ5 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A8PA6NJQ4 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A7PA6NKC0 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A22PA8MWA6 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A12PA8MX19 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A5PA8MXJ8 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A23PA8MXZ1 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 GOSR1O95249 250 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A15PP0C7V4 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A13PP0C7W8 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A14PP0C7W9 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 FAM90A24PP0C7X0 464 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 CDC34P49427 236 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-228ENST00000486227 LHX2P50458 406 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 UBE2G1P62253 170 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 MRPL30Q8TCC3 161 aaKnown RBP9.42□□□□□ -0.9
HDAC6-228ENST00000486227 DTD1Q8TEA8 209 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 RASL11BQ9BPW5 248 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 NAT8BQ9UHF3 227 aa9.42□□□□□ -0.9
HDAC6-228ENST00000486227 A0A1W2PN81 502 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 MGST3O14880 152 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 COX7A2P2O60397 106 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF124Q15973 351 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 CCDC144NLQ6NUI1 221 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 OR5AU1Q8NGC0 362 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 LINC01560Q8TB33 94 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 BARX1Q9HBU1 254 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-228ENST00000486227 ZNF319Q9P2F9 582 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 IL19Q9UHD0 177 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 LRRC3CA6NJW4 275 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 AMTP48728 403 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 CLDN18P56856 261 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 SERF2P84101 59 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 PAX5Q02548 391 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 ETFRF1Q6IPR1 90 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 Q6ZN92 141 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 TPPP3Q9BW30 176 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 SH3BGRL3Q9H299 93 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 CHODLQ9H9P2 273 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 TUBD1Q9UJT1 453 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 DOLPP1Q86YN1 238 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 OR10S1Q8NGN2 331 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 P2RX4Q99571 388 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 NAGKQ9UJ70 344 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 A0A087WWC5 75 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 KIAA1324LA8MWY0 1029 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-228ENST00000486227 SMPD2O60906 423 aa9.41□□□□□ -0.9
HDAC6-228ENST00000486227 IGFBP3P17936 291 aaPredicted RBP9.41□□□□□ -0.9
HDAC6-228ENST00000486227 OPRK1P41145 380 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms