RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 USMG5Q96IX5 58 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 REEP1Q9H902 201 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 METTL1Q9UBP6 276 aaKnown RBP4.79□□□□□ -1.64
SMC4-217ENST00000485867 MLXQ9UH92 298 aa4.79□□□□□ -1.64
SMC4-217ENST00000485867 SRRM2Q9UQ35 2752 aaKnown RBP4.79□□□□□ -1.64
SMC4-217ENST00000485867 METTL15A6NJ78 407 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 H0YJW9 148 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 RBBP9O75884 186 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 OR7C1O76099 320 aaPredicted RBP4.78□□□□□ -1.64
SMC4-217ENST00000485867 INAFM2P0DMQ5 153 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 HSD17B1P14061 328 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 RPL35AP18077 110 aaKnown RBP4.78□□□□□ -1.64
SMC4-217ENST00000485867 CBLN1P23435 193 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 PPP1CCP36873 323 aaKnown RBP4.78□□□□□ -1.64
SMC4-217ENST00000485867 RPS16P62249 146 aaKnown RBP4.78□□□□□ -1.64
SMC4-217ENST00000485867 PSG5Q15238 335 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 KISS1Q15726 138 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 C4orf46Q504U0 113 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 SOHLH1Q5JUK2 328 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 TMEM244Q5VVB8 128 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 PVRIGQ6DKI7 326 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 FAM71F2Q6NXP2 309 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 GLDNQ6ZMI3 551 aaPredicted RBP4.78□□□□□ -1.64
SMC4-217ENST00000485867 OR51A4Q8NGJ6 313 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 OSR1Q8TAX0 266 aaPredicted RBP4.78□□□□□ -1.64
SMC4-217ENST00000485867 GIPC3Q8TF64 312 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 MRPS24Q96EL2 167 aaKnown RBP4.78□□□□□ -1.64
SMC4-217ENST00000485867 TBX5Q99593 518 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 RARRES2Q99969 163 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 MAP6D1Q9H9H5 199 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 RAB9BQ9NP90 201 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 OR2S2Q9NQN1 319 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 COA4Q9NYJ1 87 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 TVP23BQ9NYZ1 205 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 ZNF230Q9UIE0 474 aaPredicted RBP4.78□□□□□ -1.64
SMC4-217ENST00000485867 ST3GAL6Q9Y274 331 aa4.78□□□□□ -1.64
SMC4-217ENST00000485867 IGKV2D-30A0A075B6S6 120 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.77□□□□□ -1.65
SMC4-217ENST00000485867 A0A1W2PQL4 384 aaPredicted RBP4.77□□□□□ -1.65
SMC4-217ENST00000485867 TMEM213A2RRL7 107 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 OR5H14A6NHG9 310 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 FAM90A23PA8MXZ1 464 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 LGALS9O00182 355 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 GABRPO00591 440 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 DEFB4AO15263 64 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 SULT1B1O43704 296 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 PRKYO43930 277 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 SNX3O60493 162 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 SULT1C4O75897 302 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 S1PR2O95136 353 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 ISG15P05161 165 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 P0DMU3 169 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 FAM231AP0DMU4 169 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 FAM231CP0DMU5 169 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 CT45A6P0DMU7 189 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 CT45A5P0DMU8 189 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 CT45A7P0DMV0 189 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 LGALS7P47929 136 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 RBM11P57052 281 aaKnown RBP4.77□□□□□ -1.65
SMC4-217ENST00000485867 SUMO2P61956 95 aaKnown RBP4.77□□□□□ -1.65
SMC4-217ENST00000485867 NHLRC3Q5JS37 347 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 C6orf183Q5T699 404 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 SYT6Q5T7P8 510 aaPredicted RBP4.77□□□□□ -1.65
SMC4-217ENST00000485867 LPCAT4Q643R3 524 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 BTNL8Q6UX41 500 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 ADAD2Q8NCV1 583 aaKnown RBP4.77□□□□□ -1.65
SMC4-217ENST00000485867 OR52L2PQ8NGH6 319 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 OR1L6Q8NGR2 347 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 OR13C3Q8NGS6 347 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 OR2G2Q8NGZ5 317 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 OR4K15Q8NH41 348 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 NEK7Q8TDX7 302 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 TNFAIP8L1Q8WVP5 186 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 THRSPQ92748 146 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 ATP6V1G3Q96LB4 118 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 TMEM68Q96MH6 324 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 RNF5Q99942 180 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 RNF126Q9BV68 326 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 IFI27L2Q9H2X8 130 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 UBQLN2Q9UHD9 624 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 ENOPH1Q9UHY7 261 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 JPT1Q9UK76 154 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 TRAPPC2LQ9UL33 140 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 ING4Q9UNL4 249 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 WASHC3Q9Y3C0 194 aa4.77□□□□□ -1.65
SMC4-217ENST00000485867 IGLV2-18A0A075B6J9 118 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 TRAV25A0A0B4J276 109 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 A8MWP6 167 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 EPM2AB3EWF7 344 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 PPP5D1E7EU14 171 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 H3BNX3 289 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 H7C2Y5 167 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 M0R129 80 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 GEMIN2O14893 280 aaKnown RBP4.76□□□□□ -1.65
SMC4-217ENST00000485867 YPEL1O60688 119 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 HLA-AP01891 365 aaKnown RBP4.76□□□□□ -1.65
SMC4-217ENST00000485867 AMBPP02760 352 aa4.76□□□□□ -1.65
SMC4-217ENST00000485867 RBMY1A1P0DJD3 496 aaKnown RBP4.76□□□□□ -1.65
SMC4-217ENST00000485867 RCC1P18754 421 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms