RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 UBE2L6O14933 153 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 SGCEO43556 437 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 SERPINA7P05543 415 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 RPSAP08865 295 aaKnown RBP0.4□□□□□ -2.35
CCDC66-219ENST00000484441 LIMS3P0CW19 117 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 LIMS4P0CW20 117 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 C1DQ13901 141 aaKnown RBP0.4□□□□□ -2.35
CCDC66-219ENST00000484441 LYZL1Q6UWQ5 148 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 OR51T1Q8NGJ9 327 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 OR1L8Q8NGR8 309 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 MBD3L1Q8WWY6 194 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 CST9LQ9H4G1 147 aa0.4□□□□□ -2.35
CCDC66-219ENST00000484441 MRM2Q9UI43 246 aaKnown RBP0.4□□□□□ -2.35
CCDC66-219ENST00000484441 TRAPPC13A5PLN9 417 aa0.39□□□□□ -2.35
CCDC66-219ENST00000484441 LDOC1O95751 146 aaPredicted RBP0.39□□□□□ -2.35
CCDC66-219ENST00000484441 CA7P43166 264 aa0.39□□□□□ -2.35
CCDC66-219ENST00000484441 EVX1P49640 407 aa0.39□□□□□ -2.35
CCDC66-219ENST00000484441 MOGQ16653 247 aa0.39□□□□□ -2.35
CCDC66-219ENST00000484441 XKRXQ6PP77 449 aa0.39□□□□□ -2.35
CCDC66-219ENST00000484441 KTN1-AS1Q86SY8 53 aa0.39□□□□□ -2.35
CCDC66-219ENST00000484441 LFNGQ8NES3 379 aa0.39□□□□□ -2.35
CCDC66-219ENST00000484441 CCDC127Q96BQ5 260 aa0.39□□□□□ -2.35
CCDC66-219ENST00000484441 CPNE2Q96FN4 548 aaPredicted RBP0.39□□□□□ -2.35
CCDC66-219ENST00000484441 NPATQ14207 1427 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 MED12LQ86YW9 2145 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 CCL2P13500 99 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 AGTR1P30556 359 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 HERVK_113P63121 156 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 SURF2Q15527 256 aaPredicted RBP0.38□□□□□ -2.35
CCDC66-219ENST00000484441 EXOC3L4Q17RC7 722 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 MESTQ5EB52 335 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 DAND5Q8N907 189 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 OR7D2Q96RA2 312 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 PRRG3Q9BZD7 231 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 TMEM222Q9H0R3 208 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 TAAR3PQ9P1P4 343 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 ENPP5Q9UJA9 477 aa0.38□□□□□ -2.35
CCDC66-219ENST00000484441 REREQ9P2R6 1566 aa0.37□□□□□ -2.35
CCDC66-219ENST00000484441 DICER1Q9UPY3 1922 aaKnown RBP0.37□□□□□ -2.35
CCDC66-219ENST00000484441 GSTZ1O43708 216 aaPredicted RBP0.37□□□□□ -2.35
CCDC66-219ENST00000484441 SYNGR1O43759 233 aa0.37□□□□□ -2.35
CCDC66-219ENST00000484441 CCR2P41597 374 aa0.37□□□□□ -2.35
CCDC66-219ENST00000484441 DAD1P61803 113 aa0.37□□□□□ -2.35
CCDC66-219ENST00000484441 USF2Q15853 346 aaPredicted RBP0.37□□□□□ -2.35
CCDC66-219ENST00000484441 SCGB1D4Q6XE38 83 aa0.37□□□□□ -2.35
CCDC66-219ENST00000484441 C7orf65Q6ZTY9 151 aa0.37□□□□□ -2.35
CCDC66-219ENST00000484441 RPS19BP1Q86WX3 136 aaKnown RBP0.37□□□□□ -2.35
CCDC66-219ENST00000484441 RNASE6Q93091 150 aaKnown RBP0.37□□□□□ -2.35
CCDC66-219ENST00000484441 TMEM56Q96MV1 263 aa0.37□□□□□ -2.35
CCDC66-219ENST00000484441 EIF5A2Q9GZV4 153 aaKnown RBP0.37□□□□□ -2.35
CCDC66-219ENST00000484441 ANKRD17O75179 2603 aaKnown RBP0.37□□□□□ -2.35
CCDC66-219ENST00000484441 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 ALPK2Q86TB3 2170 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 IGHV1-18A0A0C4DH31 117 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 F5H5K5 113 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 TXNDC9O14530 226 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 CD79BP40259 229 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 CARD18P57730 90 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 SNAP25P60880 206 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 PTPRSQ13332 1948 aa0.36□□□□□ -2.35
CCDC66-219ENST00000484441 A0A087WUU8 490 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 HMSDA8MTL9 139 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 ARL6IP5O75915 188 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 CRATP43155 626 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 GABRA2P47869 451 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 PSMD7P51665 324 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 GNA12Q03113 381 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 LRRC75BQ2VPJ9 315 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 ARHGAP11BQ3KRB8 267 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 SPATA31B1PQ5VZV4 182 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 SLC36A1Q7Z2H8 476 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 SLC13A5Q86YT5 568 aaPredicted RBP0.35□□□□□ -2.35
CCDC66-219ENST00000484441 NATD1Q8N6N6 113 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 C9orf163Q8N9P6 203 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 LRRC20Q8TCA0 184 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 PPWD1Q96BP3 646 aaKnown RBP0.35□□□□□ -2.35
CCDC66-219ENST00000484441 SFRP2Q96HF1 295 aa0.35□□□□□ -2.35
CCDC66-219ENST00000484441 MRASO14807 208 aa0.34□□□□□ -2.36
CCDC66-219ENST00000484441 KLRC4O43908 158 aa0.34□□□□□ -2.36
CCDC66-219ENST00000484441 FADS2O95864 444 aaKnown RBP0.34□□□□□ -2.36
CCDC66-219ENST00000484441 ASS1P00966 412 aaKnown RBP0.34□□□□□ -2.36
CCDC66-219ENST00000484441 HBZP02008 142 aa0.34□□□□□ -2.36
CCDC66-219ENST00000484441 AQP4P55087 323 aa0.34□□□□□ -2.36
CCDC66-219ENST00000484441 TNNC1P63316 161 aa0.34□□□□□ -2.36
CCDC66-219ENST00000484441 TMEM267Q0VDI3 215 aaPredicted RBP0.34□□□□□ -2.36
CCDC66-219ENST00000484441 OR4D1Q15615 310 aa0.34□□□□□ -2.36
CCDC66-219ENST00000484441 MIAQ16674 131 aa0.34□□□□□ -2.36
CCDC66-219ENST00000484441 POLR3HQ9Y535 204 aaPredicted RBP0.34□□□□□ -2.36
CCDC66-219ENST00000484441 ANKHD1Q8IWZ3 2542 aaKnown RBP0.33□□□□□ -2.36
CCDC66-219ENST00000484441 NAV1Q8NEY1 1877 aa0.33□□□□□ -2.36
CCDC66-219ENST00000484441 HIVEP3Q5T1R4 2406 aa0.33□□□□□ -2.36
CCDC66-219ENST00000484441 H0YC42 278 aa0.33□□□□□ -2.36
CCDC66-219ENST00000484441 LIN7AO14910 233 aaPredicted RBP0.33□□□□□ -2.36
CCDC66-219ENST00000484441 NPPAP01160 153 aa0.33□□□□□ -2.36
CCDC66-219ENST00000484441 SLC35E2BP0CK96 405 aa0.33□□□□□ -2.36
CCDC66-219ENST00000484441 KCNJ3P48549 501 aa0.33□□□□□ -2.36
CCDC66-219ENST00000484441 EMP1P54849 157 aa0.33□□□□□ -2.36
CCDC66-219ENST00000484441 RAB8AP61006 207 aa0.33□□□□□ -2.36
CCDC66-219ENST00000484441 EMX1Q04741 257 aaPredicted RBP0.33□□□□□ -2.36
CCDC66-219ENST00000484441 LCN8Q6JVE9 175 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms