RNA–Protein interactions for RNA: ENST00000482687.5

APTX-225, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-225ENST00000482687 KITLGP21583 273 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 OR10J1P30954 320 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 TAS2R46P59540 309 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 RANP62826 216 aaKnown RBP8.76□□□□□ -1.01
APTX-225ENST00000482687 COL10A1Q03692 680 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 C3orf36Q3SXR2 165 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 C4orf17Q53FE4 359 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 NCR3LG1Q68D85 454 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 TMEM182Q6ZP80 229 aaPredicted RBP8.76□□□□□ -1.01
APTX-225ENST00000482687 ZNF826PQ6ZT77 177 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 MKXQ8IYA7 352 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 SCCPDHQ8NBX0 429 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 OR2Z1Q8NG97 314 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 OR13G1Q8NGZ3 307 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 TMEM171Q8WVE6 324 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 DIRC2Q96SL1 478 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 SH3BGRL3Q9H299 93 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 PRR13Q9NZ81 148 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 IL36GQ9NZH8 169 aa8.76□□□□□ -1.01
APTX-225ENST00000482687 C14orf166Q9Y224 244 aaKnown RBP8.76□□□□□ -1.01
APTX-225ENST00000482687 POLR3KQ9Y2Y1 108 aaPredicted RBP8.76□□□□□ -1.01
APTX-225ENST00000482687 RELNP78509 3460 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 FAM221AA4D161 298 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 A6NNC1 897 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 K7EP13 123 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 GLRXP35754 106 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 FAM189A2Q15884 450 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 SPRNQ5BIV9 151 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 TMEM108Q6UXF1 575 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 SLC24A4Q8NFF2 622 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 TMEM170AQ8WVE7 144 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 NEUROG1Q92886 237 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 PLEKHJ1Q9NW61 149 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 ERRFI1Q9UJM3 462 aaPredicted RBP8.75□□□□□ -1.01
APTX-225ENST00000482687 LSM5Q9Y4Y9 91 aaKnown RBP8.75□□□□□ -1.01
APTX-225ENST00000482687 POLEQ07864 2286 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 ACACBO00763 2458 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 KALRNO60229 2985 aa8.75□□□□□ -1.01
APTX-225ENST00000482687 LRP5LA4QPB2 252 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 HSPB6O14558 160 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 SIAH2O43255 324 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 SPRY3O43610 288 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 PRB1P04280 392 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 RBM11P57052 281 aaKnown RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 KLF3P57682 345 aaPredicted RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 SELENOTP62341 195 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 CCL20P78556 96 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 ZNF154Q13106 437 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 DAZAP2Q15038 168 aaPredicted RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 ACOT6Q3I5F7 207 aaPredicted RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 FAM185AQ8N0U4 392 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 CLDND2Q8NHS1 167 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 RNASE6Q93091 150 aaKnown RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 MIEN1Q9BRT3 115 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 CABLES2Q9BTV7 478 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 ST6GALNAC5Q9BVH7 336 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 CXXC4Q9H2H0 198 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 FKBP11Q9NYL4 201 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 TAAR3PQ9P1P4 343 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 AK3Q9UIJ7 227 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 NAGKQ9UJ70 344 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 CHTOPQ9Y3Y2 248 aaKnown RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 NBASA2RRP1 2371 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 IGSF10Q6WRI0 2623 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 TRAV1-1A0A0B4J248 108 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 LOC102723971A0A1B0GUV8 181 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 J3QT63 122 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 WNT9BO14905 357 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 CA11O75493 328 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 OR7C1O76099 320 aaPredicted RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 MBPP02686 304 aaPredicted RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 TFF1P04155 84 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 TUBG1P23258 451 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 FGF12P61328 243 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 TLE1Q04724 770 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 IL24Q13007 206 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 ZNF266Q14584 549 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 COL5A1-AS1Q5SY13 56 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 MRPL41Q8IXM3 137 aaKnown RBP8.74□□□□□ -1.01
APTX-225ENST00000482687 C11orf53Q8IXP5 236 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 SAXO1Q8IYX7 474 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 PLPPR2Q96GM1 343 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 PKIBQ9C010 78 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.74□□□□□ -1.01
APTX-225ENST00000482687 TUBG2Q9NRH3 451 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
APTX-225ENST00000482687 HCFC1P51610 2035 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.73□□□□□ -1.01
APTX-225ENST00000482687 TCF21O43680 179 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 IGHV3-13P01766 116 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 CTSDP07339 412 aaPredicted RBP8.73□□□□□ -1.01
APTX-225ENST00000482687 IRF2P14316 349 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 AMY2BP19961 511 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 RPL29P47914 159 aaKnown RBP8.73□□□□□ -1.01
APTX-225ENST00000482687 PMS2P11Q13670 270 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 FAM90A2PQ658T7 463 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 LEMD1Q68G75 181 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 SSX7Q7RTT5 188 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 FAM58AQ8N1B3 248 aa8.73□□□□□ -1.01
APTX-225ENST00000482687 GBGT1Q8N5D6 347 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms