RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 SMIM18P0DKX4 95 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 CDX1P47902 265 aaPredicted RBP10.2□□□□□ -0.78
HDAC1-207ENST00000481281 THBS3P49746 956 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 LSM3P62310 102 aaKnown RBP10.2□□□□□ -0.78
HDAC1-207ENST00000481281 PSG5Q15238 335 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 ZNF660Q6AZW8 331 aaPredicted RBP10.2□□□□□ -0.78
HDAC1-207ENST00000481281 CNIH2Q6PI25 160 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 LCNL1Q6ZST4 164 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 OR13F1Q8NGS4 319 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 TSNAXQ99598 290 aaKnown RBP10.2□□□□□ -0.78
HDAC1-207ENST00000481281 FUNDC2Q9BWH2 189 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 SLC35D1Q9NTN3 355 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 ANXA10Q9UJ72 324 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 FBXO7Q9Y3I1 522 aa10.2□□□□□ -0.78
HDAC1-207ENST00000481281 TRAV41A0A0B4J266 112 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 FCN1O00602 326 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 IGLV1-40P01703 118 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 MYCNOSP40205 109 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 CX3CL1P78423 397 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 TAGLNQ01995 201 aaKnown RBP10.19□□□□□ -0.78
HDAC1-207ENST00000481281 PLGLAQ15195 96 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 MRPL41Q8IXM3 137 aaKnown RBP10.19□□□□□ -0.78
HDAC1-207ENST00000481281 MINDY2Q8NBR6 621 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 DDB2Q92466 427 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 SLC25A46Q96AG3 418 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 FLYWCH2Q96CP2 140 aaKnown RBP10.19□□□□□ -0.78
HDAC1-207ENST00000481281 P2RX4Q99571 388 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 AUNIPQ9H7T9 357 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 DIABLOQ9NR28 239 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 METTL1Q9UBP6 276 aaKnown RBP10.19□□□□□ -0.78
HDAC1-207ENST00000481281 OR2W1Q9Y3N9 320 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 RBM7Q9Y580 266 aaKnown RBP10.19□□□□□ -0.78
HDAC1-207ENST00000481281 WSB1Q9Y6I7 421 aa10.19□□□□□ -0.78
HDAC1-207ENST00000481281 DUS4LO95620 317 aaKnown RBP10.18□□□□□ -0.78
HDAC1-207ENST00000481281 IGLV2-23P01705 113 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 HLA-DQB1P01920 261 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 EGR2P11161 476 aaPredicted RBP10.18□□□□□ -0.78
HDAC1-207ENST00000481281 IGLL1P15814 213 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 NFYAP23511 347 aaPredicted RBP10.18□□□□□ -0.78
HDAC1-207ENST00000481281 DUTP33316 252 aaKnown RBP10.18□□□□□ -0.78
HDAC1-207ENST00000481281 NCS1P62166 190 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 RPS16P62249 146 aaKnown RBP10.18□□□□□ -0.78
HDAC1-207ENST00000481281 TMEM177Q53S58 311 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 UBE2NLQ5JXB2 153 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 HOGA1Q86XE5 327 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 ZNF645Q8N7E2 425 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 BEST4Q8NFU0 473 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 KCTD12Q96CX2 325 aaKnown RBP10.18□□□□□ -0.78
HDAC1-207ENST00000481281 RCC1LQ96I51 464 aaKnown RBP10.18□□□□□ -0.78
HDAC1-207ENST00000481281 ADTRPQ96IZ2 230 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 TPSG1Q9NRR2 321 aa10.18□□□□□ -0.78
HDAC1-207ENST00000481281 IGKV1D-13A0A0B4J2D9 117 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 LINC00473A8K010 186 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 XRCC3O43542 346 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 SLC25A17O43808 307 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 SOX15O60248 233 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 TUSC2O75896 110 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 CA2P00918 260 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 IGLV2-14P01704 120 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 CRYGBP07316 175 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 IGKV1-13P0DP09 117 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 RRASP10301 218 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 PTHLHP12272 177 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 LGALS7P47929 136 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 LUMP51884 338 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-207ENST00000481281 SSBP2P81877 361 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-207ENST00000481281 KIAA0141Q14154 515 aaPredicted RBP10.17□□□□□ -0.78
HDAC1-207ENST00000481281 RTL8BQ17RB0 113 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 ECSCRQ19T08 205 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 ZNF562Q6V9R5 426 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 GVQW1Q8N7I0 195 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 TCTEX1D1Q8N7M0 179 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 SAMD12Q8N8I0 201 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 BVESQ8NE79 360 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 C4orf3Q8WVX3 66 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 S100A16Q96FQ6 103 aaKnown RBP10.17□□□□□ -0.78
HDAC1-207ENST00000481281 RAX2Q96IS3 184 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 HARBI1Q96MB7 349 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 KLK15Q9H2R5 256 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 NUBP2Q9Y5Y2 271 aa10.17□□□□□ -0.78
HDAC1-207ENST00000481281 CCL24O00175 119 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 SLC22A5O76082 557 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 GABARAPO95166 117 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 VBP1P61758 197 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 CBX3Q13185 183 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 FHL3Q13643 280 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 DEFB136Q30KP8 78 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 FOXB2Q5VYV0 432 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 REC114Q7Z4M0 266 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 PPP1R27Q86WC6 154 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 SNAPC3Q92966 411 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 UBE2E2Q96LR5 201 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 DUX3Q96PT4 197 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 CLCC1Q96S66 551 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 NECAP2Q9NVZ3 263 aa10.16□□□□□ -0.78
HDAC1-207ENST00000481281 FOXA2Q9Y261 457 aaPredicted RBP10.16□□□□□ -0.78
HDAC1-207ENST00000481281 RBMX2Q9Y388 322 aaKnown RBP10.16□□□□□ -0.78
HDAC1-207ENST00000481281 A0A1W2PN81 502 aa10.15□□□□□ -0.78
HDAC1-207ENST00000481281 J3QRK9 145 aa10.15□□□□□ -0.78
HDAC1-207ENST00000481281 ARPC1BO15143 372 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms