RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 MBNL3Q9NUK0 354 aaKnown RBP11.29□□□□□ -0.6
ATG4B-218ENST00000479554 KCNIP1Q9NZI2 227 aa11.29□□□□□ -0.6
ATG4B-218ENST00000479554 ANKRD20A5PA0PJZ0 165 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 ZNF736B4DX44 427 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-218ENST00000479554 K7EIL1 84 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 PFDN1O60925 122 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 GSTP1P09211 210 aaKnown RBP11.28□□□□□ -0.6
ATG4B-218ENST00000479554 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-218ENST00000479554 MYCNOSP40205 109 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 ZNF134P52741 427 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 ACTBP60709 375 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 ARL6IP1Q15041 203 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 CDNFQ49AH0 187 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 NKAPLQ5M9Q1 402 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 TEX38Q6PEX7 206 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 PLET1Q6UQ28 207 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 ZNF554Q86TJ5 538 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 ZNF695Q8IW36 515 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 OR8H1Q8NGG4 311 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 MRPL30Q8TCC3 161 aaKnown RBP11.28□□□□□ -0.6
ATG4B-218ENST00000479554 S1PR3Q99500 378 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 NICN1Q9BSH3 213 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 MCRIP2Q9BUT9 160 aaKnown RBP11.28□□□□□ -0.6
ATG4B-218ENST00000479554 KLK11Q9UBX7 282 aa11.28□□□□□ -0.6
ATG4B-218ENST00000479554 ZNF107Q9UII5 783 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-218ENST00000479554 A0A0A6YYD4 124 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 FAUP35544 74 aaKnown RBP11.27□□□□□ -0.61
ATG4B-218ENST00000479554 KRTAP10-11P60412 298 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 GNMTQ14749 295 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 PNLIPRP3Q17RR3 467 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 CXorf66Q5JRM2 361 aaPredicted RBP11.27□□□□□ -0.61
ATG4B-218ENST00000479554 FAM71E2Q8N5Q1 922 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 OR52L2PQ8NGH6 319 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 RAB3CQ96E17 227 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 CYYR1Q96J86 154 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 ABHD14AQ9BUJ0 271 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 HRASLSQ9HDD0 168 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 PLSCR3Q9NRY6 295 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 COPZ2Q9P299 210 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 JPT1Q9UK76 154 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 COL7A1Q02388 2944 aa11.27□□□□□ -0.61
ATG4B-218ENST00000479554 WI2-2373I1.2A0A1W2PRP0 233 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 TMEM235A6NFC5 223 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 SOCS1O15524 211 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 HIST1H1DP16402 221 aaKnown RBP11.26□□□□□ -0.61
ATG4B-218ENST00000479554 VDAC1P21796 283 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 CHATP28329 748 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 F2RL1P55085 397 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 MORN2Q502X0 79 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 RBMXL1Q96E39 390 aaKnown RBP11.26□□□□□ -0.61
ATG4B-218ENST00000479554 DUX3Q96PT4 197 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 P2RX4Q99571 388 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
ATG4B-218ENST00000479554 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.61
ATG4B-218ENST00000479554 DNAH9Q9NYC9 4486 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-218ENST00000479554 MFNGO00587 321 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 RGS11O94810 467 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 RPLP1P05386 114 aaKnown RBP11.25□□□□□ -0.61
ATG4B-218ENST00000479554 GNB3P16520 340 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 BLVRBP30043 206 aaPredicted RBP11.25□□□□□ -0.61
ATG4B-218ENST00000479554 BTCP35070 178 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 RCVRNP35243 200 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 PPP1CCP36873 323 aaKnown RBP11.25□□□□□ -0.61
ATG4B-218ENST00000479554 RAB25P57735 213 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 TAS2R19P59542 299 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 GNG2P59768 71 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 HTD2P86397 168 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 FOXE3Q13461 319 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 MMDQ15546 238 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 PLAC9Q5JTB6 97 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 TMEM229BQ8NBD8 167 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 GALMQ96C23 342 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 PPP1R14BQ96C90 147 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 SULT4A1Q9BR01 284 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 MARVELD1Q9BSK0 173 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 NUBP2Q9Y5Y2 271 aa11.25□□□□□ -0.61
ATG4B-218ENST00000479554 CCL24O00175 119 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 YPEL1O60688 119 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 ELANEP08246 267 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 AKAIN1P0CW23 69 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 CBX5P45973 191 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 TMEM50BP56557 158 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 HMGN3Q15651 99 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 DEFB121Q5J5C9 76 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 C5orf24Q7Z6I8 188 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 CADM3Q8N126 398 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 RNF152Q8N8N0 203 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 OR2AK2Q8NG84 335 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 OR8U1Q8NH10 309 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 RAX2Q96IS3 184 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 ARHGAP5-AS1Q96IT6 56 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 YPEL2Q96QA6 119 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 PECRQ9BY49 303 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 MRPL20Q9BYC9 149 aaKnown RBP11.24□□□□□ -0.61
ATG4B-218ENST00000479554 HSF4Q9ULV5 492 aa11.24□□□□□ -0.61
ATG4B-218ENST00000479554 MEIS3P1A6NDR6 274 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms