RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 PHOX2AO14813 284 aa20.58■□□□□ 0.88
SYNGAP1-206ENST00000479510 TRGC1P0CF51 173 aa20.58■□□□□ 0.88
SYNGAP1-206ENST00000479510 IGHV3-64DA0A0J9YX35 117 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 SPINT2O43291 252 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 TIMM8AO60220 97 aaPredicted RBP20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 PYY3Q5JQD4 70 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 OR2B11Q5JQS5 317 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 FFAR4Q5NUL3 377 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 ABHD5Q8WTS1 349 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 FRZBQ92765 325 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 DIRC2Q96SL1 478 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 NPCDR1Q9BY65 106 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 M0R296 226 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 AQP7O14520 342 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 ZG16O60844 167 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 WISP2O76076 250 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 COL10A1Q03692 680 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 TMEM249Q2WGJ8 235 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 ZNF718Q3SXZ3 478 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 MBNL2Q5VZF2 373 aaKnown RBP20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 TMPRSS7Q7RTY8 843 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 TGIF2LYQ8IUE0 185 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 EDARADDQ8WWZ3 215 aa20.57■□□□□ 0.88
SYNGAP1-206ENST00000479510 CD55P08174 381 aa20.56■□□□□ 0.88
SYNGAP1-206ENST00000479510 PMP22Q01453 160 aa20.56■□□□□ 0.88
SYNGAP1-206ENST00000479510 BSXQ3C1V8 233 aa20.56■□□□□ 0.88
SYNGAP1-206ENST00000479510 Q6ZR03 302 aa20.56■□□□□ 0.88
SYNGAP1-206ENST00000479510 CXorf67Q86X51 503 aaPredicted RBP20.56■□□□□ 0.88
SYNGAP1-206ENST00000479510 OR10A7Q8NGE5 316 aa20.56■□□□□ 0.88
SYNGAP1-206ENST00000479510 SRD5A3Q9H8P0 318 aa20.56■□□□□ 0.88
SYNGAP1-206ENST00000479510 SLC25A22Q9H936 323 aa20.56■□□□□ 0.88
SYNGAP1-206ENST00000479510 SMCO3A2RU48 225 aa20.55■□□□□ 0.88
SYNGAP1-206ENST00000479510 IGLV1-44P01699 117 aa20.55■□□□□ 0.88
SYNGAP1-206ENST00000479510 KIR2DL2P43627 348 aaPredicted RBP20.55■□□□□ 0.88
SYNGAP1-206ENST00000479510 FAM180AQ6UWF9 173 aa20.55■□□□□ 0.88
SYNGAP1-206ENST00000479510 PFN1P07737 140 aaKnown RBP20.55■□□□□ 0.88
SYNGAP1-206ENST00000479510 GCH1P30793 250 aa20.55■□□□□ 0.88
SYNGAP1-206ENST00000479510 ADIRFQ15847 76 aa20.55■□□□□ 0.88
SYNGAP1-206ENST00000479510 OR13A1Q8NGR1 328 aa20.55■□□□□ 0.88
SYNGAP1-206ENST00000479510 OR5H1A6NKK0 313 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 C15orf65H3BRN8 121 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 VENTXO95231 258 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 ACOT6Q3I5F7 207 aaPredicted RBP20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 PRAMEF6Q5VXH4 476 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 FAM90A1Q86YD7 464 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 CNEP1R1Q8N9A8 125 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 RAB24Q969Q5 203 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 PITPNC1Q9UKF7 332 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 MARCH11A6NNE9 402 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 RPL23P62829 140 aaKnown RBP20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 RPP30P78346 268 aaKnown RBP20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 BTNL3Q6UXE8 466 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 FAM169BQ8N8A8 192 aa20.54■□□□□ 0.88
SYNGAP1-206ENST00000479510 LINC00473A8K010 186 aa20.53■□□□□ 0.88
SYNGAP1-206ENST00000479510 PRR33A8MZF0 331 aa20.53■□□□□ 0.88
SYNGAP1-206ENST00000479510 SOD3P08294 240 aa20.53■□□□□ 0.88
SYNGAP1-206ENST00000479510 CECR9P0C854 216 aa20.53■□□□□ 0.88
SYNGAP1-206ENST00000479510 SSTR5P35346 364 aa20.53■□□□□ 0.88
SYNGAP1-206ENST00000479510 IGFL2Q6UWQ7 119 aa20.53■□□□□ 0.88
SYNGAP1-206ENST00000479510 ANAPC16Q96DE5 110 aa20.53■□□□□ 0.88
SYNGAP1-206ENST00000479510 SSX3Q99909 188 aa20.53■□□□□ 0.88
SYNGAP1-206ENST00000479510 RBMXL2O75526 392 aaKnown RBP20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 AGFG2O95081 481 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 GZMHP20718 246 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 Q3ZCU0 254 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 C16orf82Q7Z2V1 217 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 OR10D4PQ8NGN7 298 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 ZDHHC16Q969W1 377 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 SARAFQ96BY9 339 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 NEIL1Q96FI4 390 aaPredicted RBP20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 PARLQ9H300 379 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 PLSCR4Q9NRQ2 329 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 PSG11Q9UQ72 335 aa20.52■□□□□ 0.88
SYNGAP1-206ENST00000479510 ZNF729A6NN14 1252 aaPredicted RBP20.52■□□□□ 0.87
SYNGAP1-206ENST00000479510 TFF3Q07654 80 aa20.52■□□□□ 0.87
SYNGAP1-206ENST00000479510 OR52E5Q8NH55 327 aa20.52■□□□□ 0.87
SYNGAP1-206ENST00000479510 R3HDM4Q96D70 268 aa20.52■□□□□ 0.87
SYNGAP1-206ENST00000479510 OR5B12Q96R08 314 aa20.52■□□□□ 0.87
SYNGAP1-206ENST00000479510 GPR61Q9BZJ8 451 aa20.52■□□□□ 0.87
SYNGAP1-206ENST00000479510 JPT1Q9UK76 154 aa20.52■□□□□ 0.87
SYNGAP1-206ENST00000479510 WDR83OSQ9Y284 106 aa20.52■□□□□ 0.87
SYNGAP1-206ENST00000479510 TRAV20A0A0B4J274 112 aa20.51■□□□□ 0.87
SYNGAP1-206ENST00000479510 H7BYZ3 331 aa20.51■□□□□ 0.87
SYNGAP1-206ENST00000479510 RBFOX2O43251 390 aaKnown RBP eCLIP20.51■□□□□ 0.878e-7■■■■□ 24.2
SYNGAP1-206ENST00000479510 MPDU1O75352 247 aa20.51■□□□□ 0.87
SYNGAP1-206ENST00000479510 CR1LQ2VPA4 569 aa20.51■□□□□ 0.87
SYNGAP1-206ENST00000479510 FAM53AQ6NSI3 398 aaPredicted RBP20.51■□□□□ 0.87
SYNGAP1-206ENST00000479510 OR51G1Q8NGK1 321 aa20.51■□□□□ 0.87
SYNGAP1-206ENST00000479510 RAB1CQ92928 201 aa20.51■□□□□ 0.87
SYNGAP1-206ENST00000479510 KIAA2026Q5HYC2 2103 aa20.51■□□□□ 0.87
SYNGAP1-206ENST00000479510 C15orf62A8K5M9 175 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 HPRT1P00492 218 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 PRDX2P32119 198 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 FOXF2Q12947 444 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 PDLIM3Q53GG5 364 aaPredicted RBP20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 C9orf106Q8NAJ2 232 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 OR4F5Q8NH21 305 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 PPP1R35Q8TAP8 253 aa20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 RPUSD4Q96CM3 377 aaKnown RBP20.5■□□□□ 0.87
SYNGAP1-206ENST00000479510 OR4F4Q96R69 305 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms