RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 IGKV1D-39P04432 117 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 NQO2P16083 231 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 NDUFB7P17568 137 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 LOXP28300 417 aaPredicted RBP6.56□□□□□ -1.36
VMA21-203ENST00000477649 SULT1A1P50225 295 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 LY6DQ14210 128 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 ATP6V1FQ16864 119 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 CXorf66Q5JRM2 361 aaPredicted RBP6.56□□□□□ -1.36
VMA21-203ENST00000477649 RPL7L1Q6DKI1 246 aaKnown RBP6.56□□□□□ -1.36
VMA21-203ENST00000477649 IL34Q6ZMJ4 242 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 SLC25A48Q6ZT89 311 aaKnown RBP6.56□□□□□ -1.36
VMA21-203ENST00000477649 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 LINC00311Q8N616 119 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 FAM216BQ8N7L0 139 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 OR1S2Q8NGQ3 325 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 OR52E5Q8NH55 327 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 ZNF596Q8TC21 504 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 TIMD4Q96H15 378 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 ZNF714Q96N38 554 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 CLCC1Q96S66 551 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 PARD6GQ9BYG4 376 aaPredicted RBP6.56□□□□□ -1.36
VMA21-203ENST00000477649 PARP12Q9H0J9 701 aaKnown RBP6.56□□□□□ -1.36
VMA21-203ENST00000477649 IFI27L2Q9H2X8 130 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 PARP11Q9NR21 331 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 HSPB7Q9UBY9 170 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 RNF150Q9ULK6 438 aa6.56□□□□□ -1.36
VMA21-203ENST00000477649 GCN1Q92616 2671 aaKnown RBP6.56□□□□□ -1.36
VMA21-203ENST00000477649 A0A087X0M5 115 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 A0A1B0GX30 115 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 hCG_1809904A0A1W2PP81 198 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 A0A1W2PPE2 198 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 A0A1W2PR64 198 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 A0A1W2PRV1 198 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 KIAA1324LA8MWY0 1029 aaPredicted RBP6.55□□□□□ -1.36
VMA21-203ENST00000477649 A8MXK9 166 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 M0R1X1 148 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 TXNL1O43396 289 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 SOX15O60248 233 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 HRASP01112 189 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 IFNA5P01569 189 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 FGF2P09038 288 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 OR8U8P0C7N1 319 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 SPP1P10451 314 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 IL3RAP26951 378 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 ATP5IP56385 69 aaPredicted RBP6.55□□□□□ -1.36
VMA21-203ENST00000477649 RPL30P62888 115 aaKnown RBP6.55□□□□□ -1.36
VMA21-203ENST00000477649 TNFRSF9Q07011 255 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 AANATQ16613 207 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 POU2AF1Q16633 256 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 PDLIM3Q53GG5 364 aaPredicted RBP6.55□□□□□ -1.36
VMA21-203ENST00000477649 FAM201AQ5SY85 155 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 DPPA3Q6W0C5 159 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 DTX2Q86UW9 622 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 PUSL1Q8N0Z8 303 aaKnown RBP6.55□□□□□ -1.36
VMA21-203ENST00000477649 ZNF439Q8NDP4 499 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 UBALD1Q8TB05 177 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 TMED6Q8WW62 240 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 RAB1CQ92928 201 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 MARC2Q969Z3 335 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 TSNAXQ99598 290 aaKnown RBP6.55□□□□□ -1.36
VMA21-203ENST00000477649 DCTN5Q9BTE1 182 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 MMP26Q9NRE1 261 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 MIOXQ9UGB7 285 aa6.55□□□□□ -1.36
VMA21-203ENST00000477649 CHD3Q12873 2000 aaKnown RBP6.54□□□□□ -1.36
VMA21-203ENST00000477649 IGHV3-43A0A0B4J1X8 118 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 A0A0G2JRQ6 117 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 FAM24AA6NFZ4 105 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 MARCH11A6NNE9 402 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 C17orf98A8MV24 154 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 ZNF705EA8MWA4 302 aaPredicted RBP6.54□□□□□ -1.36
VMA21-203ENST00000477649 I3L521 148 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 ATXN7O15265 892 aaPredicted RBP6.54□□□□□ -1.36
VMA21-203ENST00000477649 KRASP01116 189 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 TFF1P04155 84 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 FAM157CP0CG43 387 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 IGHV3-43DP0DP04 118 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 EPHA1P21709 976 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 ZP3P21754 424 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 OMGP23515 440 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 F2RL1P55085 397 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 PAX9P55771 341 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 SPCS3P61009 180 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 UBE2KP61086 200 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 RTL8BQ17RB0 113 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 CT45A1Q5HYN5 189 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 TCF23Q7RTU1 214 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 ZNF429Q86V71 674 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 LFNGQ8NES3 379 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 CT45A3Q8NHU0 189 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 ITLN2Q8WWU7 325 aaPredicted RBP6.54□□□□□ -1.36
VMA21-203ENST00000477649 DDB2Q92466 427 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 TMEM186Q96B77 213 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 PINX1Q96BK5 328 aaKnown RBP6.54□□□□□ -1.36
VMA21-203ENST00000477649 R3HDM4Q96D70 268 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 GPHA2Q96T91 129 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 ATP5SQ99766 215 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 PCGF1Q9BSM1 259 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
VMA21-203ENST00000477649 REG4Q9BYZ8 158 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms