RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 MOB3BQ86TA1 216 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 ARRDC1Q8N5I2 433 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 RTN4IP1Q8WWV3 396 aaPredicted RBP14.02□□□□□ -0.16
PTPN7-209ENST00000477554 CREB3L1Q96BA8 519 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 GINS4Q9BRT9 223 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 TINAGL1Q9GZM7 467 aaPredicted RBP14.02□□□□□ -0.16
PTPN7-209ENST00000477554 OR2S2Q9NQN1 319 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 JPT1Q9UK76 154 aa14.02□□□□□ -0.16
PTPN7-209ENST00000477554 TRBV6-7A0A0A0MS04 114 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 IGKV1-6A0A0C4DH72 117 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 LINC01548A6NM66 108 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 OOSP1A8MZH6 123 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 PLA2G10O15496 165 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 VDAC2P45880 294 aaPredicted RBP14.01□□□□□ -0.17
PTPN7-209ENST00000477554 ZNF816Q0VGE8 651 aaPredicted RBP14.01□□□□□ -0.17
PTPN7-209ENST00000477554 HES1Q14469 280 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 CCDC144NLQ6NUI1 221 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 OR4D10Q8NGI6 311 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 PRRT1Q99946 306 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 CITED2Q99967 270 aaPredicted RBP14.01□□□□□ -0.17
PTPN7-209ENST00000477554 MCUBQ9NWR8 336 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 SLC23A1Q9UHI7 598 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 SCP2D1Q9UJQ7 156 aa14.01□□□□□ -0.17
PTPN7-209ENST00000477554 KCNAB3O43448 404 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 RGS11O94810 467 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 TMEM11P17152 192 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 RAB7AP51149 207 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 C9orf152Q5JTZ5 239 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 DHRS11Q6UWP2 260 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 C8orf31Q8N9H6 132 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 POC5Q8NA72 575 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 OR6F1Q8NGZ6 308 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 RITA1Q96K30 269 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 OR1A1Q9P1Q5 309 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 LINC00527Q9UJ94 153 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 TBC1D24Q9ULP9 559 aa14□□□□□ -0.17
PTPN7-209ENST00000477554 M0QZ24 198 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 CEACAM6P40199 344 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 NSUN5P1Q3KNT7 163 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 ARSJQ5FYB0 599 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-209ENST00000477554 FAAP20Q6NZ36 180 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 C11orf88Q6PI97 169 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 THNSL2Q86YJ6 484 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 Q8N6K4 173 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 C5orf56Q8N8D9 126 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 GIMAP1Q8WWP7 306 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 EAF1Q96JC9 268 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-209ENST00000477554 NOL4LQ96MY1 436 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-209ENST00000477554 TOLLIPQ9H0E2 274 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 C11orf54Q9H0W9 315 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-209ENST00000477554 SLC2A8Q9NY64 477 aa13.99□□□□□ -0.17
PTPN7-209ENST00000477554 ST8SIA5O15466 376 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 YPEL1O60688 119 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 GAPDHP04406 335 aaKnown RBP13.98□□□□□ -0.17
PTPN7-209ENST00000477554 ZNF735P0CB33 412 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 FAM106CPP0CH98 169 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 FCGR2CP31995 323 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 H1FOOQ8IZA3 346 aaPredicted RBP13.98□□□□□ -0.17
PTPN7-209ENST00000477554 OR8H3Q8N146 312 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 YPEL2Q96QA6 119 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 ZNF2Q9BSG1 426 aaPredicted RBP13.98□□□□□ -0.17
PTPN7-209ENST00000477554 MRPL20Q9BYC9 149 aaKnown RBP13.98□□□□□ -0.17
PTPN7-209ENST00000477554 PLSCR3Q9NRY6 295 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 MOB4Q9Y3A3 225 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 NOTCH1P46531 2555 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 PRKDCP78527 4128 aaKnown RBP13.98□□□□□ -0.17
PTPN7-209ENST00000477554 FBXO24O75426 580 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 ZNF137PP52743 207 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 F2RL1P55085 397 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 EBI3Q14213 229 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 Q3ZCU0 254 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 SCGB2B2Q4G0G5 96 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 LY6G6FQ5SQ64 297 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 ZNF660Q6AZW8 331 aaPredicted RBP13.98□□□□□ -0.17
PTPN7-209ENST00000477554 C16orf82Q7Z2V1 217 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 C1QL4Q86Z23 238 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 OR51S1Q8NGJ8 323 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 TERB2Q8NHR7 220 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 EDARADDQ8WWZ3 215 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 ABHD14AQ9BUJ0 271 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 IFI27L2Q9H2X8 130 aa13.98□□□□□ -0.17
PTPN7-209ENST00000477554 DNAH3Q8TD57 4116 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 SAA2-SAA4A0A096LPE2 208 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 A0A1W2PRX2 142 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 TUSC2O75896 110 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 SAA2P0DJI9 122 aaPredicted RBP13.97□□□□□ -0.17
PTPN7-209ENST00000477554 NFYAP23511 347 aaPredicted RBP13.97□□□□□ -0.17
PTPN7-209ENST00000477554 CNTFRP26992 372 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 ECI1P42126 302 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 ARHGDIBP52566 201 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 LINC00205P59089 165 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 HERV-K104P61576 105 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 OR5AU1Q8NGC0 362 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 RDH8Q9NYR8 311 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 OR2W1Q9Y3N9 320 aa13.97□□□□□ -0.17
PTPN7-209ENST00000477554 FAM240BA0A1B0GVZ2 78 aa13.96□□□□□ -0.18
PTPN7-209ENST00000477554 ITGB1BP1O14713 200 aa13.96□□□□□ -0.18
PTPN7-209ENST00000477554 PPYP01298 95 aa13.96□□□□□ -0.18
PTPN7-209ENST00000477554 RGS21Q2M5E4 152 aa13.96□□□□□ -0.18
PTPN7-209ENST00000477554 RPL39P5Q59GN2 51 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms