RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SHISA2Q6UWI4 295 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 H1FOOQ8IZA3 346 aaPredicted RBP7.7□□□□□ -1.18
HDAC3-208ENST00000476739 SLC38A6Q8IZM9 456 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 KLHDC1Q8N7A1 406 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 C11orf44Q8N8P7 122 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 Q8N9W7 124 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 OR2T10Q8NGZ9 312 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 OR8U1Q8NH10 309 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 OR10J5Q8NHC4 309 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 CCDC59Q9P031 241 aaKnown RBP7.7□□□□□ -1.18
HDAC3-208ENST00000476739 PIPOXQ9P0Z9 390 aa7.7□□□□□ -1.18
HDAC3-208ENST00000476739 NCBP2LA6PVI3 153 aaKnown RBP7.69□□□□□ -1.18
HDAC3-208ENST00000476739 TXNL1O43396 289 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 MOSP00540 346 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 HLA-DQB1P01920 261 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 IL7P13232 177 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 NFYAP23511 347 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-208ENST00000476739 ETV6P41212 452 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 GPR12P47775 334 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 CD300CQ08708 224 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 C9orf152Q5JTZ5 239 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 TMEM69Q5SWH9 247 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 FAM71F2Q6NXP2 309 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 C10orf99Q6UWK7 81 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 FAM131AQ6UXB0 335 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 NOXA1Q86UR1 476 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 HOGA1Q86XE5 327 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 LINC00469Q8N7U9 141 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 ZNF383Q8NA42 475 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 BEST4Q8NFU0 473 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 WIPF2Q8TF74 440 aaPredicted RBP7.69□□□□□ -1.18
HDAC3-208ENST00000476739 SNAPC3Q92966 411 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 AKR1E2Q96JD6 320 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 S1PR3Q99500 378 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 GINS4Q9BRT9 223 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 WNT10AQ9GZT5 417 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 OR2D2Q9H210 308 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 SCPEP1Q9HB40 452 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 SDHAF2Q9NX18 166 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 ANXA10Q9UJ72 324 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 TRRAPQ9Y4A5 3859 aa7.69□□□□□ -1.18
HDAC3-208ENST00000476739 IGKV1D-13A0A0B4J2D9 117 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 LINC00862A6NCI5 91 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 H0YJW9 148 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 FGF16O43320 207 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 DIRAS3O95661 229 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 IGKV1-13P0DP09 117 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 VDAC2P45880 294 aaPredicted RBP7.68□□□□□ -1.18
HDAC3-208ENST00000476739 CNIH2Q6PI25 160 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 TCTE3Q8IZS6 198 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 FAM71E2Q8N5Q1 922 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 MCFD2Q8NI22 146 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 LRRC20Q8TCA0 184 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 ZFAND1Q8TCF1 268 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 DYNC2LI1Q8TCX1 351 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 ACOT12Q8WYK0 555 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 CMTM3Q96MX0 182 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 MIXL1Q9H2W2 232 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 LINC00527Q9UJ94 153 aa7.68□□□□□ -1.18
HDAC3-208ENST00000476739 MRPS7Q9Y2R9 242 aaKnown RBP7.68□□□□□ -1.18
HDAC3-208ENST00000476739 M0QZK8 103 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 M0R1X1 148 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 CTDSP2O14595 271 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 IGLV2-14P01704 120 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 IGKV1-16P04430 117 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 CD28P10747 220 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 ACTBP60709 375 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 ARSJQ5FYB0 599 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-208ENST00000476739 SNX29P2Q8IUI4 249 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 OR5AN1Q8NGI8 311 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 NOL4LQ96MY1 436 aaPredicted RBP7.67□□□□□ -1.18
HDAC3-208ENST00000476739 HSPB9Q9BQS6 159 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 GHITMQ9H3K2 345 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 MBD2Q9UBB5 411 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 ANAPC10Q9UM13 185 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 GAB2Q9UQC2 676 aa7.67□□□□□ -1.18
HDAC3-208ENST00000476739 OR5H14A6NHG9 310 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 PEX14O75381 377 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 TUSC2O75896 110 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 IGHG2P01859 326 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 CTXN2P0C2S0 81 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 AADACP22760 399 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 HLA-DMAP28067 261 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 PRSS3P35030 304 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 IFITM3Q01628 133 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 MMDQ15546 238 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 RNASE12Q5GAN4 147 aaKnown RBP7.66□□□□□ -1.18
HDAC3-208ENST00000476739 TCTEX1D4Q5JR98 221 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 SPANXN2Q5MJ10 180 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 MZT2AQ6P582 158 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 LAX1Q8IWV1 398 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 ENKURQ8TC29 256 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 GPX8Q8TED1 209 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 AP3S1Q92572 193 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 NXF2Q9GZY0 626 aaKnown RBP7.66□□□□□ -1.18
HDAC3-208ENST00000476739 LIN7CQ9NUP9 197 aaKnown RBP7.66□□□□□ -1.18
HDAC3-208ENST00000476739 EXTL2Q9UBQ6 330 aa7.66□□□□□ -1.18
HDAC3-208ENST00000476739 ZNF107Q9UII5 783 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-208ENST00000476739 WASHC3Q9Y3C0 194 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms