RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 BAP18Q8IXM2 172 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 LRRC34Q8IZ02 419 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 STACQ99469 402 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 TMEM109Q9BVC6 243 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 MND1Q9BWT6 205 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 HES4Q9HCC6 221 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 SLC2A9Q9NRM0 540 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 TXNL4BQ9NX01 149 aaKnown RBP2.5□□□□□ -2.01
VPS50-212ENST00000476413 ADGRB3O60242 1522 aa2.5□□□□□ -2.01
VPS50-212ENST00000476413 DICER1Q9UPY3 1922 aaKnown RBP2.5□□□□□ -2.01
VPS50-212ENST00000476413 ABCC11Q96J66 1382 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 IGHV3-15A0A0B4J1V0 119 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 MDFIC2A0A1B0GVS7 189 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 OR5K4A6NMS3 321 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 OR11H12B2RN74 326 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 MT-CO2P00403 227 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 GZMBP10144 247 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 CD200P41217 278 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 LGALS9BQ3B8N2 356 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 HSP90B2PQ58FF3 399 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 TNFAIP8L2Q6P589 184 aaPredicted RBP2.49□□□□□ -2.01
VPS50-212ENST00000476413 AMTNQ6UX39 209 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 OR11H2Q8NH07 326 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 OR4K13Q8NH42 304 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 MS4A6EQ96DS6 147 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 ZNF471Q9BX82 626 aaPredicted RBP2.49□□□□□ -2.01
VPS50-212ENST00000476413 USE1Q9NZ43 259 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 SLX4Q8IY92 1834 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 MAP3K5Q99683 1374 aa2.49□□□□□ -2.01
VPS50-212ENST00000476413 COL4A2P08572 1712 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 PLXNA3P51805 1871 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 MUC21A0A0G2JKD1 596 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 MUC21A0A140T8X8 626 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 C21orf140B9A014 251 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 IL3P08700 152 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 RPL12P30050 165 aaKnown RBP2.48□□□□□ -2.01
VPS50-212ENST00000476413 CDK9P50750 372 aaKnown RBP2.48□□□□□ -2.01
VPS50-212ENST00000476413 HES1Q14469 280 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 SAPCD1Q5SSQ6 148 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.48□□□□□ -2.01
VPS50-212ENST00000476413 N4BP2L1Q5TBK1 243 aaPredicted RBP2.48□□□□□ -2.01
VPS50-212ENST00000476413 ARL5BQ96KC2 179 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 DKKL1Q9UK85 242 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 POLR1DQ9Y2S0 133 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 KLK5Q9Y337 293 aaPredicted RBP2.48□□□□□ -2.01
VPS50-212ENST00000476413 MMACHCQ9Y4U1 282 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 KIF15Q9NS87 1388 aa2.48□□□□□ -2.01
VPS50-212ENST00000476413 PCNX2A6NKB5 2137 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 OR6C6A6NF89 314 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 KNCNA6PVL3 124 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 H3BPC8 53 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 SLC16A4O15374 487 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 NIPSNAP2O75323 286 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 LRRN1Q6UXK5 716 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 SPATA12Q7Z6I5 190 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 PACRGLQ8N7B6 248 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 DAND5Q8N907 189 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 CNEP1R1Q8N9A8 125 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 ANKRD36BP1Q96IX9 119 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 VWDEQ8N2E2 1590 aa2.47□□□□□ -2.01
VPS50-212ENST00000476413 TRGV4A0A0C4DH28 118 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 GRIFINA4D1Z8 144 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 TRAPPC3O43617 180 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 IGHV1-69P01742 117 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 DDTP30046 118 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 COMMD7Q86VX2 200 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 Q8NDZ9 215 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 PIGXQ8TBF5 258 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 RPS4Y2Q8TD47 263 aa2.46□□□□□ -2.02
VPS50-212ENST00000476413 UBFD1O14562 309 aaKnown RBP2.45□□□□□ -2.02
VPS50-212ENST00000476413 REG1BP48304 166 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 BTN3A2P78410 334 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 C1orf194Q5T5A4 169 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 SBSNQ6UWP8 590 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 CCDC121Q6ZUS5 278 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 GPHB5Q86YW7 130 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 CLDND2Q8NHS1 167 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 RAB8BQ92930 207 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 SFRP2Q96HF1 295 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 PECRQ9BY49 303 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 FGFR1OP2Q9NVK5 253 aa2.45□□□□□ -2.02
VPS50-212ENST00000476413 C11orf86A6NJI1 115 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 LRRN3E7EW58 273 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 NDUFB2O95178 105 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 APOEP02649 317 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 HLA-DQB2P05538 268 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 RPS12P25398 132 aaKnown RBP2.44□□□□□ -2.02
VPS50-212ENST00000476413 PLPPR5Q32ZL2 321 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 UBL4BQ8N7F7 174 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 PHOSPHO2Q8TCD6 241 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 RNF133Q8WVZ7 376 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 DNAJC30Q96LL9 226 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 PARD6GQ9BYG4 376 aaPredicted RBP2.44□□□□□ -2.02
VPS50-212ENST00000476413 CXCL16Q9H2A7 254 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 PARVGQ9HBI0 331 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 BABAM2Q9NXR7 383 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 FAM215AQ9Y5M1 114 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 REREQ9P2R6 1566 aa2.44□□□□□ -2.02
VPS50-212ENST00000476413 SCN9AQ15858 1988 aa2.43□□□□□ -2.02
VPS50-212ENST00000476413 BAHCC1Q9P281 2608 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms