RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 RCC2Q9P258 522 aaKnown RBP8.72□□□□□ -1.01
EXOSC1-208ENST00000476234 IGHV3-72A0A0B4J1Y9 119 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 C12orf77C9JDV5 145 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 M0QZK8 103 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 CRTAPO75718 401 aaPredicted RBP8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 FUT3P21217 361 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 CEACAM3P40198 252 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 REG1BP48304 166 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 ZNF134P52741 427 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 CBX3Q13185 183 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 HNF4GQ14541 408 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 MOGAT2Q3SYC2 334 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 ZNF260Q3ZCT1 412 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 KHDC1LQ5JSQ8 128 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 THNSL2Q86YJ6 484 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 GAPTQ8N292 157 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 TOMM40LQ969M1 308 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 ST6GALNAC6Q969X2 333 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 FAM46BQ96A09 425 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 ZNF486Q96H40 463 aaPredicted RBP8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 SELENOIQ9C0D9 397 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 ZFP57Q9NU63 452 aa8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 ZNF107Q9UII5 783 aaPredicted RBP8.71□□□□□ -1.02
EXOSC1-208ENST00000476234 HUWE1Q7Z6Z7 4374 aaKnown RBP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 TMEM30CPA0ZSE6 113 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 PSMB11A5LHX3 300 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 OOSP1A8MZH6 123 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 ZNF736B4DX44 427 aaPredicted RBP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 NDUFB6O95139 128 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 RCC1P18754 421 aaPredicted RBP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 MECP2P51608 486 aaKnown RBP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 NKX2-5P52952 324 aaPredicted RBP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 FCN2Q15485 313 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 SRSF7Q16629 238 aaKnown RBP eCLIP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 ZFP69Q49AA0 526 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 C18orf65Q6ZTR6 163 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 C8orf86Q6ZUL3 223 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 C5orf56Q8N8D9 126 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 TMEM229BQ8NBD8 167 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 ZNF439Q8NDP4 499 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 OR10A7Q8NGE5 316 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 OR10R2Q8NGX6 335 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 OR4K15Q8NH41 348 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 OR1L1Q8NH94 360 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 MUC7Q8TAX7 377 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 ARL11Q969Q4 196 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 RPEQ96AT9 228 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 NOL4LQ96MY1 436 aaPredicted RBP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 FYTTD1Q96QD9 318 aaKnown RBP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 OR51J1Q9H342 316 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 RIMS4Q9H426 269 aaPredicted RBP8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 GFOD1Q9NXC2 390 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 LINC00527Q9UJ94 153 aa8.7□□□□□ -1.02
EXOSC1-208ENST00000476234 DNAH1Q9P2D7 4330 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 A0A0A6YYD4 124 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 TRBV6-6A0A0A6YYG2 114 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 IGHV1-3A0A0C4DH29 117 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 LCE6AA0A183 80 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 SERPINE3A8MV23 424 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 PRAF2O60831 178 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 PDCD6O75340 191 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 IGKV1D-33P01593 117 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 IGKV1-33P01594 117 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 IL5P05113 134 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 GSTP1P09211 210 aaKnown RBP8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 AKAIN1P0CW23 69 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 GZMHP20718 246 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 CHATP28329 748 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 FAUP35544 74 aaKnown RBP8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 EBI3Q14213 229 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 PNLIPRP3Q17RR3 467 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 CT45A1Q5HYN5 189 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 C9orf152Q5JTZ5 239 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 ZNF329Q86UD4 541 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 LINC00311Q8N616 119 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 Q8N6K4 173 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 CT45A3Q8NHU0 189 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 C20orf85Q9H1P6 137 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 MED28Q9H204 178 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 PLSCR3Q9NRY6 295 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 MCUBQ9NWR8 336 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 FLVCR2Q9UPI3 526 aa8.69□□□□□ -1.02
EXOSC1-208ENST00000476234 UBE2QL1A1L167 161 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 MCRIP1C9JLW8 97 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 SDCBPO00560 298 aaPredicted RBP8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 HSD17B6O14756 317 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 SOCS1O15524 211 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 CD74P04233 296 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 FAM106CPP0CH98 169 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 TMEM11P17152 192 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 BLVRBP30043 206 aaPredicted RBP8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 VEGFCP49767 419 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 ARHGDIBP52566 201 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 ACTBP60709 375 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 ZNF816Q0VGE8 651 aaPredicted RBP8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 GNMTQ14749 295 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 CDNFQ49AH0 187 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 PLAC9Q5JTB6 97 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 CCDC144NLQ6NUI1 221 aa8.68□□□□□ -1.02
EXOSC1-208ENST00000476234 STEAP1BQ6NZ63 245 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms