RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 LINC00574Q9H8X3 128 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 KCNIP2Q9NS61 270 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 TAS2R1Q9NYW7 299 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 CARHSP1Q9Y2V2 147 aaKnown RBP3.04□□□□□ -1.92
SMC5-203ENST00000475540 PRELID3BQ9Y3B1 194 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 KMT2EQ8IZD2 1858 aa3.04□□□□□ -1.92
SMC5-203ENST00000475540 GRIN2BQ13224 1484 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 PLXNB3Q9ULL4 1909 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 LINC00862A6NCI5 91 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 C15orf65H3BRN8 121 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 GUSBP08236 651 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 OR10J1P30954 320 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 CA7P43166 264 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 GZMMP51124 257 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 TMEM33P57088 247 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 LINC00313P59037 77 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 BTN3A2P78410 334 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 ZNF616Q08AN1 781 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 FUT5Q11128 374 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 CDK10Q15131 360 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 PLPPR5Q32ZL2 321 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 PYCR3Q53H96 274 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 ALKAL1Q6UXT8 129 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 SLC36A1Q7Z2H8 476 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 LYG2Q86SG7 212 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 KRTAP13-1Q8IUC0 172 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 ZFP62Q8NB50 900 aaPredicted RBP3.03□□□□□ -1.92
SMC5-203ENST00000475540 NEK7Q8TDX7 302 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 SLC25A44Q96H78 314 aaPredicted RBP3.03□□□□□ -1.92
SMC5-203ENST00000475540 SFRP2Q96HF1 295 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 PLA2G12AQ9BZM1 189 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 GID8Q9NWU2 228 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 TRAPPC1Q9Y5R8 145 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 PXMP4Q9Y6I8 212 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 THSD7AQ9UPZ6 1657 aa3.03□□□□□ -1.92
SMC5-203ENST00000475540 BAZ2AQ9UIF9 1905 aaKnown RBP3.03□□□□□ -1.92
SMC5-203ENST00000475540 KIAA1671Q9BY89 1806 aa3.03□□□□□ -1.93
SMC5-203ENST00000475540 ROCK1Q13464 1354 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 YLPM1P49750 1951 aaKnown RBP3.02□□□□□ -1.93
SMC5-203ENST00000475540 GOLGA6L4A6NEF3 574 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 OR4C45A6NMZ5 311 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 ZNF878C9JN71 531 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 M0R381 172 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 BHLHE40O14503 412 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 FSTL3O95633 263 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 OPN1SWP03999 348 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 CD34P28906 385 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 OPRM1P35372 400 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 POLR2GP62487 172 aaKnown RBP eCLIP3.02□□□□□ -1.93
SMC5-203ENST00000475540 IGFBP7Q16270 282 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 DAZ4Q86SG3 579 aaKnown RBP3.02□□□□□ -1.93
SMC5-203ENST00000475540 BAP18Q8IXM2 172 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 C20orf196Q8IYI0 205 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 ZNF676Q8N7Q3 588 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 APCDD1LQ8NCL9 501 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 LHFPL5Q8TAF8 219 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 RBPMSQ93062 196 aaKnown RBP3.02□□□□□ -1.93
SMC5-203ENST00000475540 TSSK6Q9BXA6 273 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 ULBP3Q9BZM4 244 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 GABARAPL1Q9H0R8 117 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 ZNF286AQ9HBT8 521 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 MRPL40Q9NQ50 206 aaKnown RBP3.02□□□□□ -1.93
SMC5-203ENST00000475540 DAZ1Q9NQZ3 744 aaKnown RBP3.02□□□□□ -1.93
SMC5-203ENST00000475540 PAQR5Q9NXK6 330 aaPredicted RBP3.02□□□□□ -1.93
SMC5-203ENST00000475540 DHCR7Q9UBM7 475 aaKnown RBP3.02□□□□□ -1.93
SMC5-203ENST00000475540 MRPS16Q9Y3D3 137 aaKnown RBP3.02□□□□□ -1.93
SMC5-203ENST00000475540 ANKRD12Q6UB98 2062 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 DCCP43146 1447 aa3.02□□□□□ -1.93
SMC5-203ENST00000475540 DHX57Q6P158 1386 aaKnown RBP3.01□□□□□ -1.93
SMC5-203ENST00000475540 CEP170Q5SW79 1584 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 COL5A1P20908 1838 aaPredicted RBP3.01□□□□□ -1.93
SMC5-203ENST00000475540 C2orf74A8MZ97 194 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 GSTZ1O43708 216 aaPredicted RBP3.01□□□□□ -1.93
SMC5-203ENST00000475540 OR7C1O76099 320 aaPredicted RBP3.01□□□□□ -1.93
SMC5-203ENST00000475540 APOMO95445 188 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 TTRP02766 147 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 CD7P09564 240 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 CCL1P22362 96 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 ATP6V0CP27449 155 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 PSG4Q00888 419 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 FABP9Q0Z7S8 132 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 PDGFRLQ15198 375 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 GLT6D1Q7Z4J2 308 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 AKAP14Q86UN6 197 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 SGPP2Q8IWX5 399 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.01□□□□□ -1.93
SMC5-203ENST00000475540 OR2T27Q8NH04 317 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 OR4X1Q8NH49 305 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 MCFD2Q8NI22 146 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 CPNE2Q96FN4 548 aaPredicted RBP3.01□□□□□ -1.93
SMC5-203ENST00000475540 TBX5Q99593 518 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 NIPSNAP1Q9BPW8 284 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 OR2D2Q9H210 308 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 ARMC1Q9NVT9 282 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 ZNF586Q9NXT0 402 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 ANAPC10Q9UM13 185 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 SVILO95425 2214 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 PIK3C2GO75747 1445 aa3.01□□□□□ -1.93
SMC5-203ENST00000475540 TMED7-TICAM2A0A0A6YYA0 188 aa3□□□□□ -1.93
SMC5-203ENST00000475540 IGKV1-12A0A0C4DH73 117 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms