RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RPL8P62917 257 aaKnown RBP9.45□□□□□ -0.9
VAPB-204ENST00000475243 IRF3Q14653 427 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 ZNF658BQ4V348 819 aaPredicted RBP9.45□□□□□ -0.9
VAPB-204ENST00000475243 TMEM74BQ9NUR3 256 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 COL6A6A6NMZ7 2263 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 MARF1Q9Y4F3 1742 aaKnown RBP9.45□□□□□ -0.9
VAPB-204ENST00000475243 PGPA6NDG6 321 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 P2RY6Q15077 328 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 SRXN1Q9BYN0 137 aa9.45□□□□□ -0.9
VAPB-204ENST00000475243 NPBWR2P48146 333 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 RELBQ01201 579 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 AMMECR1LQ6DCA0 310 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 NEU1Q99519 415 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 A1L4Q6 167 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 UNC119Q13432 240 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 C19orf54Q5BKX5 351 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 DDB2Q92466 427 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 hCG_38984A0A1B0GV85 526 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 FAM53AQ6NSI3 398 aaPredicted RBP9.44□□□□□ -0.9
VAPB-204ENST00000475243 WNT2BQ93097 391 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 PIMREGQ9BSJ6 248 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 PILRAQ9UKJ1 303 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 TAF1LQ8IZX4 1826 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 TAS2R60P59551 318 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 PEAR1Q5VY43 1037 aaPredicted RBP9.44□□□□□ -0.9
VAPB-204ENST00000475243 OR52M1Q8NGK5 317 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 PHLDA3Q9Y5J5 127 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 FAM74A7A6NL05 159 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 C17orf51A8MQB3 221 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 DIRC3C9JPN6 131 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 GFRA3O60609 400 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 NUDT3O95989 172 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 MIC13Q5XKP0 118 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 FGFRL1Q8N441 504 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 CALYQ9NYX4 217 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 HOXA6P31267 233 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 FAM3BP58499 235 aaPredicted RBP9.44□□□□□ -0.9
VAPB-204ENST00000475243 ZNF273Q14593 569 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 XIRP1Q702N8 1843 aaKnown RBP9.44□□□□□ -0.9
VAPB-204ENST00000475243 SHISA5Q8N114 240 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 LINC01560Q8TB33 94 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 HS3ST3B1Q9Y662 390 aa9.44□□□□□ -0.9
VAPB-204ENST00000475243 ELOA3CA0A087WX78 387 aaPredicted RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 PPIAL4CA0A0B4J2A2 164 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 SP9P0CG40 484 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 PPIAL4GP0DN37 164 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 ZNF25P17030 456 aaPredicted RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 CXCL2P19875 107 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 HERPUD1Q15011 391 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 CALHM1Q8IU99 346 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 KLF14Q8TD94 323 aaPredicted RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 CCL19Q99731 98 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 TLNRD1Q9H1K6 362 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 KLK15Q9H2R5 256 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 HSPB7Q9UBY9 170 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 FGF5P12034 268 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 MC5RP33032 325 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 PQLC2Q6ZP29 291 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 CENPVQ7Z7K6 275 aaPredicted RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 TMEM56-RWDD3S4R434 201 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 COL24A1Q17RW2 1714 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 HSPB1P04792 205 aaKnown RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 FXYD3Q14802 87 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 RHOVQ96L33 236 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 COL4A1P02462 1669 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 H0Y980 276 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 IGHV3-23P01764 117 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 PRSS8Q16651 343 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 IBA57Q5T440 356 aaKnown RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 SAP25Q8TEE9 199 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 TIAF1O95411 115 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 MUC1P15941 1255 aaPredicted RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 FUT5Q11128 374 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 ABHD12Q8N2K0 398 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 DCTN5Q9BTE1 182 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 DDA1Q9BW61 102 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 AKIRIN1Q9H9L7 192 aaPredicted RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 DLL3Q9NYJ7 618 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 LHFPL6Q9Y693 200 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 LIMS1P48059 325 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 COMPP49747 757 aaPredicted RBP9.43□□□□□ -0.9
VAPB-204ENST00000475243 SLC25A47Q6Q0C1 308 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 FDCSPQ8NFU4 85 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 ADIPOR1Q96A54 375 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 SCNM1Q9BWG6 230 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 IDI2-AS1Q9NZ38 188 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 TNFSF18Q9UNG2 199 aa9.43□□□□□ -0.9
VAPB-204ENST00000475243 KLK2P20151 261 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 ADIPOQQ15848 244 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 MARS2Q96GW9 593 aaKnown RBP9.42□□□□□ -0.9
VAPB-204ENST00000475243 ODAMA1E959 279 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 PGLYRP1O75594 196 aaPredicted RBP9.42□□□□□ -0.9
VAPB-204ENST00000475243 UBE2V2Q15819 145 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 MIOXQ9UGB7 285 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 LOC105371242A0A075B767 164 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 HLA-DQB1P01920 261 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 SEC11BP0C7V7 166 aa9.42□□□□□ -0.9
VAPB-204ENST00000475243 OTX1P32242 354 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms