RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 BTNL3Q6UXE8 466 aa17.99■□□□□ 0.47
CCM2-206ENST00000474617 C8orf31Q8N9H6 132 aa17.99■□□□□ 0.47
CCM2-206ENST00000474617 HSD17B11Q8NBQ5 300 aa17.99■□□□□ 0.47
CCM2-206ENST00000474617 OR52E5Q8NH55 327 aa17.99■□□□□ 0.47
CCM2-206ENST00000474617 ZCCHC14Q8WYQ9 949 aaKnown RBP17.99■□□□□ 0.47
CCM2-206ENST00000474617 AIFM2Q9BRQ8 373 aa17.99■□□□□ 0.47
CCM2-206ENST00000474617 HRH4Q9H3N8 390 aa17.99■□□□□ 0.47
CCM2-206ENST00000474617 SMDT1Q9H4I9 107 aa17.99■□□□□ 0.47
CCM2-206ENST00000474617 LAMA5O15230 3695 aa17.99■□□□□ 0.47
CCM2-206ENST00000474617 M0R1X1 148 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 TNFRSF13BO14836 293 aaPredicted RBP17.98■□□□□ 0.47
CCM2-206ENST00000474617 NDUFB3O43676 98 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 CST7O76096 145 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 TSPAN15O95858 294 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 PRH1P02810 166 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 NQO2P16083 231 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 G6PCP35575 357 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 BRWD1-AS2P59051 145 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 RPP30P78346 268 aaKnown RBP17.98■□□□□ 0.47
CCM2-206ENST00000474617 PDLIM3Q53GG5 364 aaPredicted RBP17.98■□□□□ 0.47
CCM2-206ENST00000474617 UNQ6494/PRO21346Q6UXR6 183 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 ODF3L1Q8IXM7 274 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 FAM216BQ8N7L0 139 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 R3HDM4Q96D70 268 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 NARS2Q96I59 477 aaKnown RBP17.98■□□□□ 0.47
CCM2-206ENST00000474617 C19orf12Q9NSK7 152 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 FAM90A27PA6NNH2 459 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 ATP6V0CP27449 155 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 DVL1P1P54792 670 aaPredicted RBP17.98■□□□□ 0.47
CCM2-206ENST00000474617 LTC4SQ16873 150 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 CLEC9AQ6UXN8 241 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 TMEM14EPQ6UXP3 125 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 ZNF295-AS1Q8N0V1 137 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 ZNF439Q8NDP4 499 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 OR2G3Q8NGZ4 309 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 SCGB1C1Q8TD33 95 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 CA5BP1Q8WTZ4 195 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 PSMG3Q9BT73 122 aaPredicted RBP17.98■□□□□ 0.47
CCM2-206ENST00000474617 NARFLQ9H6Q4 476 aa17.98■□□□□ 0.47
CCM2-206ENST00000474617 NDUFB7P17568 137 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 ID4P47928 161 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 PPOXP50336 477 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 RPL31P62899 125 aaKnown RBP17.97■□□□□ 0.47
CCM2-206ENST00000474617 C10orf91Q5T1B1 145 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 NCR3LG1Q68D85 454 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 DHRS7BQ6IAN0 325 aaPredicted RBP17.97■□□□□ 0.47
CCM2-206ENST00000474617 FAM71F2Q6NXP2 309 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 HEPN1Q6WQI6 88 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 SLC25A48Q6ZT89 311 aaKnown RBP17.97■□□□□ 0.47
CCM2-206ENST00000474617 SVBPQ8N300 66 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 DDB2Q92466 427 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 PINX1Q96BK5 328 aaKnown RBP17.97■□□□□ 0.47
CCM2-206ENST00000474617 CLCC1Q96S66 551 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 PBDC1Q9BVG4 233 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 RBKSQ9H477 322 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 CISD1Q9NZ45 108 aaKnown RBP17.97■□□□□ 0.47
CCM2-206ENST00000474617 CARHSP1Q9Y2V2 147 aaKnown RBP17.97■□□□□ 0.47
CCM2-206ENST00000474617 DSCAMO60469 2012 aa17.97■□□□□ 0.47
CCM2-206ENST00000474617 DCHS1Q96JQ0 3298 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 TANC2Q9HCD6 1990 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 SPTA1P02549 2419 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 ATMQ13315 3056 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 DSCAML1Q8TD84 2053 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 IGHV1-69-2A0A0G2JMI3 117 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 A0A1B0GW64 132 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 SELLP14151 372 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 RAB2AP61019 212 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 HFEQ30201 348 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 ZNF672Q499Z4 452 aaPredicted RBP17.96■□□□□ 0.47
CCM2-206ENST00000474617 CT45A1Q5HYN5 189 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 SLC25A24Q6NUK1 477 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 TCF23Q7RTU1 214 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 PUSL1Q8N0Z8 303 aaKnown RBP17.96■□□□□ 0.47
CCM2-206ENST00000474617 TMEM217Q8N7C4 229 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 CT45A3Q8NHU0 189 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 CCL17Q92583 94 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 TMEM204Q9BSN7 226 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 SEC11CQ9BY50 192 aa17.96■□□□□ 0.47
CCM2-206ENST00000474617 IGF2RP11717 2491 aa17.96■□□□□ 0.46
CCM2-206ENST00000474617 TRBV23-1A0A0A0MS06 115 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 GPR37O15354 613 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 FCGR3BO75015 233 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 ZNF134P52741 427 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 MRPS11P82912 194 aaKnown RBP17.95■□□□□ 0.46
CCM2-206ENST00000474617 SERF2P84101 59 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 ADORA2A-AS1P86434 159 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 IZUMO4Q1ZYL8 232 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 OR2B11Q5JQS5 317 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 ZNF714Q96N38 554 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 UQCC1Q9NVA1 299 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 PLA2G2EQ9NZK7 142 aa17.95■□□□□ 0.46
CCM2-206ENST00000474617 USF3Q68DE3 2245 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 PROP1O75360 226 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 NXPH3O95157 252 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 HBE1P02100 147 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 APOC3P02656 99 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 CD5P06127 495 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 C1QTNF9P0C862 333 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 IAPPP10997 89 aa17.94■□□□□ 0.46
CCM2-206ENST00000474617 SPCS3P61009 180 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms