RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 FAM24AA6NFZ4 105 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 H3BUA1 57 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 IL6RP08887 468 aaPredicted RBP3.92□□□□□ -1.78
CCNL1-215ENST00000474539 SSTR5P35346 364 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 POLR2IP36954 125 aaKnown RBP3.92□□□□□ -1.78
CCNL1-215ENST00000474539 EGR4Q05215 589 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 WDR25Q64LD2 544 aaPredicted RBP3.92□□□□□ -1.78
CCNL1-215ENST00000474539 AMMECR1LQ6DCA0 310 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 LCN12Q6JVE5 192 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 C11orf87Q6NUJ2 197 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 BIVMQ86UB2 503 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 WDFY1Q8IWB7 410 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM86BQ8N661 226 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 OR10G4Q8NGN3 311 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 OR10G9Q8NGN4 311 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 OR10G7Q8NGN6 311 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 OR13C5Q8NGS8 318 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 TVP23CQ96ET8 276 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 RHOVQ96L33 236 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 SMIM7Q9BQ49 75 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 PRO3102Q9H379 93 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 AKIRIN1Q9H9L7 192 aaPredicted RBP3.92□□□□□ -1.78
CCNL1-215ENST00000474539 SHROOM3Q8TF72 1996 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 PTPRFP10586 1907 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 TRGV11A0A075B6L2 103 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 TRBV5-7A0A0A0MS05 114 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 C9orf170A2RU37 121 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 VGLL3A8MV65 326 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 DCTN6O00399 190 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 G6PCP35575 357 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 GZMMP51124 257 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 NHLRC3Q5JS37 347 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 CLEC9AQ6UXN8 241 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 C1orf122Q6ZSJ8 110 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 ZAR1Q86SH2 424 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 C5orf17Q8NAS9 161 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 C11orf54Q9H0W9 315 aaPredicted RBP3.92□□□□□ -1.78
CCNL1-215ENST00000474539 A0A0G2JNJ9 132 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 A0A1W2PRD5 423 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 A0A1W2PRF3 423 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 A0A1W2PRM7 423 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 HMSDA8MTL9 139 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 TNFSF13O75888 250 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 P01737 135 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 VSIG8P0DPA2 414 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 LCN2P80188 198 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 DGCR2P98153 550 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM97Q5BJF2 176 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 LCN15Q6UWW0 184 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 LINC00114Q6XXX2 140 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 MYPOPQ86VE0 399 aaPredicted RBP3.92□□□□□ -1.78
CCNL1-215ENST00000474539 GAPTQ8N292 157 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 RFLNBQ8N5W9 214 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF439Q8NDP4 499 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 OR8D4Q8NGM9 314 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 Q8TCH9 128 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 TMEM101Q96IK0 257 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 Q96M66 194 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 LINC00052Q96N35 136 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 CABLES2Q9BTV7 478 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 PAXXQ9BUH6 204 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 ZMAT4Q9H898 229 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 TNFRSF12AQ9NP84 129 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 ZNF586Q9NXT0 402 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 SPRR3Q9UBC9 169 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 Q9UFV3 132 aa3.92□□□□□ -1.78
CCNL1-215ENST00000474539 ING1Q9UK53 422 aaPredicted RBP3.92□□□□□ -1.78
CCNL1-215ENST00000474539 GOLGA4Q13439 2230 aaKnown RBP3.92□□□□□ -1.78
CCNL1-215ENST00000474539 IGHV1-18A0A0C4DH31 117 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 MAP1LC3B2A6NCE7 125 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 A6NIN4 97 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 FAM74A7A6NL05 159 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 RPLP1P05386 114 aaKnown RBP3.91□□□□□ -1.78
CCNL1-215ENST00000474539 CD55P08174 381 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 CCL1P22362 96 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 RPL15P61313 204 aaKnown RBP3.91□□□□□ -1.78
CCNL1-215ENST00000474539 COTL1Q14019 142 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 C2orf68Q2NKX9 166 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 Q6AWC8 147 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 SSX7Q7RTT5 188 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 KLHDC1Q8N7A1 406 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 SLC25A38Q96DW6 304 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 SEC22AQ96IW7 307 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 TMPRSS13Q9BYE2 586 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 MAP1LC3BQ9GZQ8 125 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 C21orf62Q9NYP8 219 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 WSB1Q9Y6I7 421 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 PTPRZ1P23471 2315 aaPredicted RBP3.91□□□□□ -1.78
CCNL1-215ENST00000474539 PRRC2BQ5JSZ5 2229 aaKnown RBP3.91□□□□□ -1.78
CCNL1-215ENST00000474539 TRBV7-1A0A0A6YYK4 115 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 ISLRO14498 428 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 OVOL1O14753 267 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 AGPAT2O15120 278 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 PITX3O75364 302 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 OR9G9P0C7N8 305 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 TEX261Q6UWH6 196 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 PRSS57Q6UWY2 283 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 STHQ8IWL8 128 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 GBGT1Q8N5D6 347 aa3.91□□□□□ -1.78
CCNL1-215ENST00000474539 LRRC75AQ8NAA5 344 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms