RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 H3BUA1 57 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 OR2A4O95047 310 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 CNIH1O95406 144 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 CD3GP09693 182 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 RPS27AP62979 156 aaKnown RBP9.46□□□□□ -0.9
TRAF4-209ENST00000473421 YIF1BQ5BJH7 314 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 TMPRSS11AQ6ZMR5 421 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 C19orf35Q6ZS72 473 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 ADAD2Q8NCV1 583 aaKnown RBP9.46□□□□□ -0.9
TRAF4-209ENST00000473421 CACNG8Q8WXS5 425 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 TSNAXQ99598 290 aaKnown RBP9.46□□□□□ -0.9
TRAF4-209ENST00000473421 AKIP1Q9NQ31 210 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 COA4Q9NYJ1 87 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 ABRACLQ9P1F3 81 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 CKLFQ9UBR5 152 aa9.46□□□□□ -0.9
TRAF4-209ENST00000473421 MSGN1A6NI15 193 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 SOCS1O15524 211 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 DCKP27707 260 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 QRFPP83859 136 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 GUCA2BQ16661 112 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 MOGAT2Q3SYC2 334 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 CDH26Q8IXH8 852 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 NEDD4LQ96PU5 975 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 CHMP1AQ9HD42 196 aaPredicted RBP9.45□□□□□ -0.9
TRAF4-209ENST00000473421 ZNF230Q9UIE0 474 aaPredicted RBP9.45□□□□□ -0.9
TRAF4-209ENST00000473421 AK3Q9UIJ7 227 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 DIMT1Q9UNQ2 313 aaKnown RBP9.45□□□□□ -0.9
TRAF4-209ENST00000473421 LRRC42Q9Y546 428 aa9.45□□□□□ -0.9
TRAF4-209ENST00000473421 A0A0J9YWU9 116 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 CXorf65A6NEN9 183 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 PPP5D1E7EU14 171 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 M0R1X1 148 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 ITGB1BP1O14713 200 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 SPDEFO95238 335 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 RHOGP84095 191 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 IDO2Q6ZQW0 420 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 LRRTM1Q86UE6 522 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 PDPNQ86YL7 162 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 KCNG3Q8TAE7 436 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 PTX4Q96A99 478 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 ZC4H2Q9NQZ6 224 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 SLC35D1Q9NTN3 355 aa9.44□□□□□ -0.9
TRAF4-209ENST00000473421 C2orf70A6NJV1 201 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 FOLR2P14207 255 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 AADACP22760 399 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 KIR2DS2P43631 304 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 HLA-DRB3P79483 266 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 TATDN3Q17R31 274 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 C10orf55Q5SWW7 151 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 OR2K2Q8NGT1 345 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 GGHQ92820 318 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 SNAPC3Q92966 411 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 USMG5Q96IX5 58 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 UQCC2Q9BRT2 126 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 TM2D1Q9BX74 207 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 SLC2A8Q9NY64 477 aa9.43□□□□□ -0.9
TRAF4-209ENST00000473421 TRBV6-6A0A0A6YYG2 114 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 TRBV9A0A0B4J1U6 114 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 FOXI3A8MTJ6 420 aaPredicted RBP9.42□□□□□ -0.9
TRAF4-209ENST00000473421 TMEM14DPA8MWL7 114 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 OR2C1O95371 312 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 CELP19835 753 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 ZBTB25P24278 435 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 LGALS7P47929 136 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 TMEM50BP56557 158 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 TAGLNQ01995 201 aaKnown RBP9.42□□□□□ -0.9
TRAF4-209ENST00000473421 EXOSC2Q13868 293 aaKnown RBP9.42□□□□□ -0.9
TRAF4-209ENST00000473421 C1orf100Q5SVJ3 147 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 LAIR2Q6ISS4 152 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 CEMP1Q6PRD7 247 aaPredicted RBP9.42□□□□□ -0.9
TRAF4-209ENST00000473421 TMEM61Q8N0U2 210 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 HARBI1Q96MB7 349 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 TMEM59Q9BXS4 323 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 LPAR5Q9H1C0 372 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 Q9N2K0 584 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 RDH8Q9NYR8 311 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 PEMTQ9UBM1 199 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 ZNF221Q9UK13 617 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 EXOSC1Q9Y3B2 195 aaKnown RBP9.42□□□□□ -0.9
TRAF4-209ENST00000473421 S4R3C0 116 aa9.42□□□□□ -0.9
TRAF4-209ENST00000473421 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.41□□□□□ -0.9
TRAF4-209ENST00000473421 IGHV3-23P01764 117 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 APOA2P02652 100 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 OR9G9P0C7N8 305 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 MYL12AP19105 171 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 LAX1Q8IWV1 398 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 NKAIN3Q8N8D7 197 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 DYNLRB2Q8TF09 96 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 EDARADDQ8WWZ3 215 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 DDB2Q92466 427 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 TMEM80Q96HE8 168 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 GFI1Q99684 422 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 PLEKHJ1Q9NW61 149 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 SDHAF2Q9NX18 166 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 GHRLQ9UBU3 117 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 MLXQ9UH92 298 aa9.41□□□□□ -0.9
TRAF4-209ENST00000473421 HECTD4Q9Y4D8 3996 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 CIB2O75838 187 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 OR2J3O76001 311 aa9.4□□□□□ -0.9
TRAF4-209ENST00000473421 CBLN1P23435 193 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms