RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SLC25A33Q9BSK2 321 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 MRPL20Q9BYC9 149 aaKnown RBP10.44□□□□□ -0.74
TPM3-216ENST00000473036 PLSCR3Q9NRY6 295 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 SERTAD4Q9NUC0 356 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 SCP2D1Q9UJQ7 156 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 RNF150Q9ULK6 438 aa10.44□□□□□ -0.74
TPM3-216ENST00000473036 MEIS3P1A6NDR6 274 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 BET1O15155 118 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 HSPA12AO43301 675 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 RAB3DO95716 219 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 CD74P04233 296 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 FCER2P06734 321 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 CT45A6P0DMU7 189 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 CT45A5P0DMU8 189 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 CT45A7P0DMV0 189 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 TSPAN5P62079 268 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 HNF4GQ14541 408 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 LPCAT3Q6P1A2 487 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 TGIF2LXQ8IUE1 241 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 OR6F1Q8NGZ6 308 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 EDARADDQ8WWZ3 215 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 SNAPC3Q92966 411 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 EAF1Q96JC9 268 aaPredicted RBP10.43□□□□□ -0.74
TPM3-216ENST00000473036 SCGB3A2Q96PL1 93 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 PRRT1Q99946 306 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 GINS4Q9BRT9 223 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 BEX1Q9HBH7 125 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 PITPNC1Q9UKF7 332 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 RNF114Q9Y508 228 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 PLXNB1O43157 2135 aa10.43□□□□□ -0.74
TPM3-216ENST00000473036 WNK1Q9H4A3 2382 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 SLC22A5O76082 557 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 OR5H8P0DN80 308 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 IL3RAP26951 378 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 F2RL1P55085 397 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 BAK1Q16611 211 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 DHRS11Q6UWP2 260 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 GLDNQ6ZMI3 551 aaPredicted RBP10.42□□□□□ -0.74
TPM3-216ENST00000473036 OVCH2Q7RTZ1 564 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 LYSMD2Q8IV50 215 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 H1FOOQ8IZA3 346 aaPredicted RBP10.42□□□□□ -0.74
TPM3-216ENST00000473036 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
TPM3-216ENST00000473036 GIMAP1Q8WWP7 306 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 TRIM63Q969Q1 353 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 SDHCQ99643 169 aaPredicted RBP10.42□□□□□ -0.74
TPM3-216ENST00000473036 RANBP3Q9H6Z4 567 aaPredicted RBP10.42□□□□□ -0.74
TPM3-216ENST00000473036 RAB18Q9NP72 206 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 COPZ2Q9P299 210 aa10.42□□□□□ -0.74
TPM3-216ENST00000473036 CD3DP04234 171 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 FAM106CPP0CH98 169 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 TMEM11P17152 192 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 CNTFRP26992 372 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 HLA-DMAP28067 261 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 CD1BP29016 333 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 ASAH1Q13510 395 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 C11orf88Q6PI97 169 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 C5orf56Q8N8D9 126 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 OR4C13Q8NGP0 309 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 SLC25A21Q9BQT8 299 aaPredicted RBP10.41□□□□□ -0.74
TPM3-216ENST00000473036 NPFFR1Q9GZQ6 430 aa10.41□□□□□ -0.74
TPM3-216ENST00000473036 IGKV1D-13A0A0B4J2D9 117 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 LINC01548A6NM66 108 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 J3QRK9 145 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 RAB29O14966 203 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 IGLV2-14P01704 120 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 OR8U9P0C7N5 309 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 IGKV1-13P0DP09 117 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 NFYAP23511 347 aaPredicted RBP10.4□□□□□ -0.74
TPM3-216ENST00000473036 S100GP29377 79 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 HRH1P35367 487 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 ARHGDIBP52566 201 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 KLF9Q13886 244 aaPredicted RBP10.4□□□□□ -0.74
TPM3-216ENST00000473036 HES1Q14469 280 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 ABCA11PQ4W5N1 156 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 RNASE12Q5GAN4 147 aaKnown RBP10.4□□□□□ -0.74
TPM3-216ENST00000473036 C16orf82Q7Z2V1 217 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 Q8N9W7 124 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 DRAXINQ8NBI3 349 aaPredicted RBP10.4□□□□□ -0.74
TPM3-216ENST00000473036 OR8U1Q8NH10 309 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 CITED1Q99966 193 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 WNT10AQ9GZT5 417 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 SDHAF2Q9NX18 166 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 SLC2A8Q9NY64 477 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 EHFQ9NZC4 300 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 PIPOXQ9P0Z9 390 aa10.4□□□□□ -0.74
TPM3-216ENST00000473036 H0YJW9 148 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 M0QZ24 198 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 LYRM1O43325 122 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 TXNL1O43396 289 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 TUSC2O75896 110 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 PMP2P02689 132 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 SURF2Q15527 256 aaPredicted RBP10.39□□□□□ -0.75
TPM3-216ENST00000473036 FAM71F2Q6NXP2 309 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 C10orf99Q6UWK7 81 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 ZNF383Q8NA42 475 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 TERB2Q8NHR7 220 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 HRASLSQ9HDD0 168 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 MCUBQ9NWR8 336 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 MOB4Q9Y3A3 225 aa10.39□□□□□ -0.75
TPM3-216ENST00000473036 OR2W1Q9Y3N9 320 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms