RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TMEM211Q6ICI0 200 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 UEVLDQ8IX04 471 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 KLHDC1Q8N7A1 406 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 OR11L1Q8NGX0 322 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 PLPPR1Q8TBJ4 325 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 MRPL30Q8TCC3 161 aaKnown RBP8.57□□□□□ -1.04
APTX-216ENST00000472896 LHX4Q969G2 390 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 GMPPAQ96IJ6 420 aaPredicted RBP8.57□□□□□ -1.04
APTX-216ENST00000472896 SLC39A9Q9NUM3 307 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 CDC42EP3Q9UKI2 254 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 RNF115Q9Y4L5 304 aa8.57□□□□□ -1.04
APTX-216ENST00000472896 NCOA6Q14686 2063 aaPredicted RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 HSBP1L1C9JCN9 74 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 HS3ST1O14792 307 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 MLNRO43193 412 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 DHRS3O75911 302 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 TMEM50AO95807 157 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 PPYP01298 95 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 TMEM11P17152 192 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 GCH1P30793 250 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 CTRLP40313 264 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 FGF8P55075 233 aaPredicted RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 HBG1P69891 147 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 HBG2P69892 147 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 SRSF7Q16629 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
APTX-216ENST00000472896 PRSS8Q16651 343 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 PRTGQ2VWP7 1150 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 TBC1D26Q86UD7 250 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 NUDT10Q8NFP7 164 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 OR5D13Q8NGL4 314 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 PSMF1Q92530 271 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 RPUSD4Q96CM3 377 aaKnown RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 NEIL1Q96FI4 390 aaPredicted RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 PGAM5Q96HS1 289 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 ALKBH3Q96Q83 286 aaPredicted RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 LAMTOR2Q9Y2Q5 125 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 MRPS16Q9Y3D3 137 aaKnown RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 COX11Q9Y6N1 276 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 PRRC2AP48634 2157 aaKnown RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 NIPBLQ6KC79 2804 aaeCLIP8.56□□□□□ -1.04
APTX-216ENST00000472896 TRAV30A0A087WSZ9 112 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 IGHV2-70DA0A0C4DH43 119 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 A0A1W2PNV4 684 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 C17orf105B2RV13 164 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 CNOT4O95628 575 aaKnown RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 NRASP01111 189 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 KRASP01116 189 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 HOXC12P31275 282 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 HNRNPA3P51991 378 aaKnown RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 POU3F1Q03052 451 aaPredicted RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 Q0VG73 95 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 C3AR1Q16581 482 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 PLPPR5Q32ZL2 321 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 FAM78BQ5VT40 261 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 ASCL4Q6XD76 172 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 Q6ZS49 121 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 C20orf196Q8IYI0 205 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 C1orf174Q8IYL3 243 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 ZNF525Q8N782 197 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 OR5T1Q8NG75 326 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 OR5B3Q8NH48 314 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 ADIPOR1Q96A54 375 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 SPSB1Q96BD6 273 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 HSPB9Q9BQS6 159 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 RSG1Q9BU20 258 aa8.56□□□□□ -1.04
APTX-216ENST00000472896 MRPL13Q9BYD1 178 aaKnown RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 SEPSECSQ9HD40 501 aaKnown RBP8.56□□□□□ -1.04
APTX-216ENST00000472896 MPDZO75970 2070 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 SPG11Q96JI7 2443 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 CTXND1A0A1B0GTU2 59 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 TMPRSS2O15393 492 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 NUPR1O60356 82 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 WDR1O75083 606 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 REG1AP05451 166 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 OPRM1P35372 400 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 BIDP55957 195 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 ARG2P78540 354 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 MMDQ15546 238 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 PNKDQ8N490 385 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 STPG4Q8N801 248 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 VN1R17PQ8TDU5 208 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 ST8SIA1Q92185 356 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 TMUB1Q9BVT8 246 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 RTN4RQ9BZR6 473 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 CHRNA10Q9GZZ6 450 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 ZNF703Q9H7S9 590 aaPredicted RBP8.55□□□□□ -1.04
APTX-216ENST00000472896 PNRC2Q9NPJ4 139 aaKnown RBP8.55□□□□□ -1.04
APTX-216ENST00000472896 ZNF586Q9NXT0 402 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 ELOVL5Q9NYP7 299 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 ZNF581Q9P0T4 197 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 ST3GAL6Q9Y274 331 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 CACNA1CQ13936 2221 aa8.55□□□□□ -1.04
APTX-216ENST00000472896 RNF212BA8MTL3 300 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 H0Y980 276 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 GLI4P10075 376 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 CEACAM8P31997 349 aaPredicted RBP8.54□□□□□ -1.04
APTX-216ENST00000472896 ADMP35318 185 aa8.54□□□□□ -1.04
APTX-216ENST00000472896 COMPP49747 757 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms