RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 CD300LFQ8TDQ1 290 aa13.6□□□□□ -0.23
CCM2-205ENST00000472223 SSMEM1Q8WWF3 244 aa13.6□□□□□ -0.23
CCM2-205ENST00000472223 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
CCM2-205ENST00000472223 SLC2A9Q9NRM0 540 aa13.6□□□□□ -0.23
CCM2-205ENST00000472223 LIN7CQ9NUP9 197 aaKnown RBP13.6□□□□□ -0.23
CCM2-205ENST00000472223 TBC1D24Q9ULP9 559 aa13.6□□□□□ -0.23
CCM2-205ENST00000472223 GPR132Q9UNW8 380 aa13.6□□□□□ -0.23
CCM2-205ENST00000472223 KCNIP3Q9Y2W7 256 aa13.6□□□□□ -0.23
CCM2-205ENST00000472223 WASHC3Q9Y3C0 194 aa13.6□□□□□ -0.23
CCM2-205ENST00000472223 SONP18583 2426 aaKnown RBP13.6□□□□□ -0.23
CCM2-205ENST00000472223 A0A1W2PPI3 338 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 PGLYRP1O75594 196 aaPredicted RBP13.59□□□□□ -0.23
CCM2-205ENST00000472223 IFNA2P01563 188 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 PI3P19957 117 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 RND3P61587 244 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 IFITM3Q01628 133 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 LDLRAD3Q86YD5 345 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 THNSL2Q86YJ6 484 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 PDPNQ86YL7 162 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 SGPP2Q8IWX5 399 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 DYNAPQ8N1N2 210 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 CENPSQ8N2Z9 138 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 TCTEX1D1Q8N7M0 179 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 OR2T10Q8NGZ9 312 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 OR51H1Q8NH63 302 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 AJUBAQ96IF1 538 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 SLC35D1Q9NTN3 355 aa13.59□□□□□ -0.23
CCM2-205ENST00000472223 SOX21Q9Y651 276 aaPredicted RBP13.59□□□□□ -0.23
CCM2-205ENST00000472223 IGHV3-72A0A0B4J1Y9 119 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 MDFIC2A0A1B0GVS7 189 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 H3BUX3 64 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 MPPED1O15442 326 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 B3GALNT1O75752 331 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 IGLV2-14P01704 120 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 TCRBP04435 133 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 ANXA3P12429 323 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 AKR1C4P17516 323 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 SLC6A1P30531 599 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 PLET1Q6UQ28 207 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 GLDNQ6ZMI3 551 aaPredicted RBP13.58□□□□□ -0.24
CCM2-205ENST00000472223 TBC1D26Q86UD7 250 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 OR5AN1Q8NGI8 311 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 FLYWCH2Q96CP2 140 aaKnown RBP13.58□□□□□ -0.24
CCM2-205ENST00000472223 AIFM2Q9BRQ8 373 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 PRDM13Q9H4Q3 707 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 NUBP2Q9Y5Y2 271 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 POMT1Q9Y6A1 747 aa13.58□□□□□ -0.24
CCM2-205ENST00000472223 PIGBOS1A0A0B4J2F0 54 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 FCGR3BO75015 233 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 PROP1O75360 226 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 MOSP00540 346 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 IGKV1D-33P01593 117 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 IGKV1-33P01594 117 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 SERPINE2P07093 398 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 TMEM11P17152 192 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 PAX6P26367 422 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 IER3P46695 156 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 DHRS7BQ6IAN0 325 aaPredicted RBP13.57□□□□□ -0.24
CCM2-205ENST00000472223 SPAG16Q8N0X2 631 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 TMEM86BQ8N661 226 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 ZNF383Q8NA42 475 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 OR4C13Q8NGP0 309 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 OR4S2Q8NH73 311 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 C5orf66Q9H5L9 145 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 C1RLQ9NZP8 487 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 VSIG4Q9Y279 399 aa13.57□□□□□ -0.24
CCM2-205ENST00000472223 A0A0A6YYJ9 748 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 H0YJW9 148 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 ARPC1BO15143 372 aaKnown RBP13.56□□□□□ -0.24
CCM2-205ENST00000472223 HOXA3O43365 443 aaPredicted RBP13.56□□□□□ -0.24
CCM2-205ENST00000472223 PTTG1O95997 202 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 SNRNP70P08621 437 aaKnown RBP13.56□□□□□ -0.24
CCM2-205ENST00000472223 F2RP25116 425 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 BTCP35070 178 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 RPS16P62249 146 aaKnown RBP13.56□□□□□ -0.24
CCM2-205ENST00000472223 HABP2Q14520 560 aaPredicted RBP13.56□□□□□ -0.24
CCM2-205ENST00000472223 RGS21Q2M5E4 152 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 TMEM128Q5BJH2 165 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 OR2B11Q5JQS5 317 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 LIAT1Q6ZQX7 453 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 MRGPRFQ96AM1 343 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 ZNF48Q96MX3 618 aaPredicted RBP13.56□□□□□ -0.24
CCM2-205ENST00000472223 RNF5Q99942 180 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 RTBDNQ9BSG5 229 aaPredicted RBP13.56□□□□□ -0.24
CCM2-205ENST00000472223 C20orf85Q9H1P6 137 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 RAB18Q9NP72 206 aa13.56□□□□□ -0.24
CCM2-205ENST00000472223 C3orf85A0A1B0GTC6 90 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 LINC00473A8K010 186 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 SHOXO15266 292 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 TCF21O43680 179 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 ATG12O94817 140 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 VENTXO95231 258 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 H2AFB2P0C5Z0 115 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 CD24P25063 80 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
CCM2-205ENST00000472223 HNF4GQ14541 408 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 LY6EQ16553 131 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 NRARPQ7Z6K4 114 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 CFHR4Q92496 578 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 C5orf30Q96GV9 206 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms