RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 NKX2-6A6NCS4 301 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 GZMBP10144 247 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 UCNP55089 124 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ZNF826PQ6ZT77 177 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ADAD2Q8NCV1 583 aaKnown RBP11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LINC00470Q9BZP3 86 aa11.52□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TSPAN2O60636 221 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CEACAM8P31997 349 aaPredicted RBP11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 OR9G4Q8NGQ1 327 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 YIPF6Q96EC8 236 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TNFRSF18Q9Y5U5 241 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 HYPMO75409 117 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 S1PR2O95136 353 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CXorf1O96002 111 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 HLA-DRB3P79483 266 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LURAP1LQ8IV03 231 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 AKIP1Q9NQ31 210 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 DDX60LQ5H9U9 1706 aaKnown RBP11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 C11orf44Q8N8P7 122 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CLPSL1A2RUU4 121 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 RBM11P57052 281 aaKnown RBP11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SCMH1Q96GD3 660 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 FRRS1LQ9P0K9 344 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 F11RQ9Y624 299 aaKnown RBP11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 J3QW42 95 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MDKP21741 143 aaPredicted RBP11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 OR8D4Q8NGM9 314 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TCRBV5S1A1TA0A578 114 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 OR2A4O95047 310 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 GMPPAQ96IJ6 420 aaPredicted RBP11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 OR2A7Q96R45 310 aa11.51□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TET2Q6N021 2002 aaPredicted RBP11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LIPT2A6NK58 231 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MBPP02686 304 aaPredicted RBP11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CLPSP04118 112 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SELENOHQ8IZQ5 122 aaKnown RBP11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PGLYRP4Q96LB8 373 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 KIR2DL4Q99706 377 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MRPL20Q9BYC9 149 aaKnown RBP11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 IL36RNQ9UBH0 155 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 S4R3C0 116 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 A8MWL6 223 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ACAA1P09110 424 aaPredicted RBP11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 DUX3Q96PT4 197 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PRSS27Q9BQR3 290 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 A0A087X0M5 115 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 A0A1B0GX30 115 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ITLN1Q8WWA0 313 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 GPR82Q96P67 336 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 RPL27AP46776 148 aaKnown RBP11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 IL24Q13007 206 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 C1QTNF12Q5T7M4 302 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 GALNT14Q96FL9 552 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 GPHA2Q96T91 129 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 NRAPQ86VF7 1730 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 RIMKLAQ8IXN7 391 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 OR1P1Q8NH06 330 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 WIPI2Q9Y4P8 454 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 VSIG10L2P0DP72 767 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 FAM159AQ6UWV7 190 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SLC16A13Q7RTY0 426 aa11.5□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 DCAF12L2Q5VW00 463 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 HSPB7Q9UBY9 170 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CX3CL1P78423 397 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ZNF385AQ96PM9 386 aaKnown RBP11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 Q9N2K0 584 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MAST2Q6P0Q8 1798 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LINC01560Q8TB33 94 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 VAX2Q9UIW0 290 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ANK1P16157 1881 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 EIF3GO75821 320 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 SORL1Q92673 2214 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PRRC2AP48634 2157 aaKnown RBP11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LILRA1O75019 489 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TNFSF10P50591 281 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TMEM177Q53S58 311 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 VAX1Q5SQQ9 334 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ATP1A1-AS1Q5TC04 95 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ANAPC16Q96DE5 110 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MRM2Q9UI43 246 aaKnown RBP11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PLSCR2Q9NRY7 297 aa11.49□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TMEM170BQ5T4T1 132 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ABHD1Q96SE0 405 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 COL11A1P12107 1806 aaPredicted RBP11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 LIFP15018 202 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 S100A7L2Q5SY68 101 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 VKORC1L1Q8N0U8 176 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TCRBV16S1A1N1A0A5B0 115 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 DEGS2Q6QHC5 323 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 TMEM252Q8N6L7 170 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 ZPLD1Q8TCW7 415 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 KBTBD11O94819 623 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 CRYBB2P43320 205 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 UCP2P55851 309 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 PEAR1Q5VY43 1037 aaPredicted RBP11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 KLK8O60259 260 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MESTQ5EB52 335 aa11.48□□□□□ -0.57
NPHP3-ACAD11-201ENST00000471702 MAP1LC3AQ9H492 121 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms