RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 ATG5Q9H1Y0 275 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 MOB4Q9Y3A3 225 aa10.76□□□□□ -0.69
HMGN1-211ENST00000471260 FAM90A10PA6NDY2 464 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 FAM90A7PA6NKC0 464 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 ADARB2-AS1A8MUL3 147 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 FAM90A23PA8MXZ1 464 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 DISC1C4P0D8 188 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 MCRIP1C9JLW8 97 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 CA11O75493 328 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 RAB3DO95716 219 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 AMY1AP04745 511 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 AMY2AP04746 511 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 GLAP06280 429 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 SSTR5P35346 364 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 UBE2MP61081 183 aaKnown RBP10.75□□□□□ -0.69
HMGN1-211ENST00000471260 ACTBL2Q562R1 376 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 UTF1Q5T230 341 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 REC114Q7Z4M0 266 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 COMMD7Q86VX2 200 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 LINC00311Q8N616 119 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 OR4X2Q8NGF9 303 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 OR10X1Q8NGY0 326 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 SCARB1Q8WTV0 552 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 ARL11Q969Q4 196 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 RCC2Q9P258 522 aaKnown RBP10.75□□□□□ -0.69
HMGN1-211ENST00000471260 GHRLQ9UBU3 117 aa10.75□□□□□ -0.69
HMGN1-211ENST00000471260 MRPS28Q9Y2Q9 187 aaKnown RBP10.75□□□□□ -0.69
HMGN1-211ENST00000471260 TSSC4Q9Y5U2 329 aaPredicted RBP10.75□□□□□ -0.69
HMGN1-211ENST00000471260 A0A1W2PPI3 338 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 ZNF736B4DX44 427 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-211ENST00000471260 G3V4G9 280 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 C15orf65H3BRN8 121 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 FGF16O43320 207 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 GAPDHP04406 335 aaKnown RBP10.74□□□□□ -0.69
HMGN1-211ENST00000471260 SNRNP70P08621 437 aaKnown RBP10.74□□□□□ -0.69
HMGN1-211ENST00000471260 UBBP0CG47 229 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 ZNF816Q0VGE8 651 aaPredicted RBP10.74□□□□□ -0.69
HMGN1-211ENST00000471260 ZNF345Q14585 488 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 TMEM95Q3KNT9 176 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 HIST2H2BDQ6DRA6 164 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 AWAT2Q6E213 333 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 GLIPR1L1Q6UWM5 242 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 IDO2Q6ZQW0 420 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 LYG1Q8N1E2 194 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 JAGN1Q8N5M9 183 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 WFDC9Q8NEX5 89 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 OR51S1Q8NGJ8 323 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 NEK7Q8TDX7 302 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 LEAP2Q969E1 77 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 ZNF581Q9P0T4 197 aa10.74□□□□□ -0.69
HMGN1-211ENST00000471260 A0A1W2PP11 408 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 CD3DP04234 171 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 RLN1P04808 185 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 HLA-GP17693 338 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 GNG10P50151 68 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 TAS2R31P59538 309 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 RPS27AP62979 156 aaKnown RBP10.73□□□□□ -0.69
HMGN1-211ENST00000471260 EBI3Q14213 229 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 LTC4SQ16873 150 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 SIGIRRQ6IA17 410 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 TMEM65Q6PI78 240 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 TRAT1Q6PIZ9 186 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 GAPTQ8N292 157 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 DRAM1Q8N682 238 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 OR5M8Q8NGP6 311 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 SUN5Q8TC36 379 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 LRRC20Q8TCA0 184 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 GFOD1Q9NXC2 390 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 ANAPC10Q9UM13 185 aa10.73□□□□□ -0.69
HMGN1-211ENST00000471260 TRAV39A0A0B4J263 110 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 A0A0D9SG52 128 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 TCRBV4S1A1TA0A5B7 111 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 SDCBPO00560 298 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-211ENST00000471260 HSD17B6O14756 317 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 SPINT2O43291 252 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 IGHV3-7P01780 117 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 GSTP1P09211 210 aaKnown RBP10.72□□□□□ -0.69
HMGN1-211ENST00000471260 OR4E1P0C645 316 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 TMEM11P17152 192 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 CXCL2P19875 107 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 ZP3P21754 424 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 IL3RAP26951 378 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 LOXL3P58215 753 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 PLA2G7Q13093 441 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 HES1Q14469 280 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 ARL6IP1Q15041 203 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 C4orf46Q504U0 113 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 FBLN7Q53RD9 439 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 RNASE10Q5GAN6 216 aaKnown RBP10.72□□□□□ -0.69
HMGN1-211ENST00000471260 LIN54Q6MZP7 749 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 FAAP20Q6NZ36 180 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 SLC51BQ86UW2 128 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 C12orf45Q8N5I9 185 aaPredicted RBP10.72□□□□□ -0.69
HMGN1-211ENST00000471260 C5orf56Q8N8D9 126 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 TRAPPC2LQ9UL33 140 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 PRKDCP78527 4128 aaKnown RBP10.72□□□□□ -0.69
HMGN1-211ENST00000471260 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
HMGN1-211ENST00000471260 IGHV1-3A0A0C4DH29 117 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 GOSR2O14653 212 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms