RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 DEFB125Q8N687 156 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 ZNF721Q8TF20 911 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 NINJ1Q92982 152 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 DDIT4LQ96D03 193 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 ZFYVE21Q9BQ24 234 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 LRRC61Q9BV99 259 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 QTRT1Q9BXR0 403 aaKnown RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 KRTAP9-2Q9BYQ4 174 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 PLSCR4Q9NRQ2 329 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 PHPT1Q9NRX4 125 aaPredicted RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 SERTAD4Q9NUC0 356 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 DECR2Q9NUI1 292 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 MRPL27Q9P0M9 148 aaKnown RBP3.6□□□□□ -1.83
VPS50-210ENST00000471188 CACNG5Q9UF02 275 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 PIGLQ9Y2B2 252 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 OR51B2Q9Y5P1 312 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 LRRK1Q38SD2 2015 aa3.6□□□□□ -1.83
VPS50-210ENST00000471188 A0A1W2PPV4 95 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 FAM231BA6NCW3 169 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 H3BML4 177 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 MT-ATP6P00846 226 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 CELA3BP08861 270 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 IGLC1P0CG04 106 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 NPY1RP25929 384 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 CNN3Q15417 329 aaKnown RBP3.59□□□□□ -1.83
VPS50-210ENST00000471188 FAM110CQ1W6H9 321 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 ZNF818PQ6ZRF7 136 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 STPG3Q8N7X2 389 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 NT5CQ8TCD5 201 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 CPT1CQ8TCG5 803 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 NEUROG1Q92886 237 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 RAB37Q96AX2 223 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 COX14Q96I36 57 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 WDR54Q9H977 334 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 PRTFDC1Q9NRG1 225 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 CCL28Q9NRJ3 127 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 TMEM38BQ9NVV0 291 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 COPS7AQ9UBW8 275 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 PILRAQ9UKJ1 303 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 MMP17Q9ULZ9 603 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 CABIN1Q9Y6J0 2220 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 hDV102S1A0JD36 115 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 OR4C46A6NHA9 309 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 PRRT4C9JH25 899 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 H3BUT2 72 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 K7EQM0 130 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 MLNRO43193 412 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 RBMXL2O75526 392 aaKnown RBP3.59□□□□□ -1.83
VPS50-210ENST00000471188 EFEMP2O95967 443 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 ZNF17P17021 662 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 ANOS1P23352 680 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 UCP1P25874 307 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 TIMP3P35625 211 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 CLRN1P58418 232 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 UBE2G1P62253 170 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 ARG2P78540 354 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 MALLQ13021 153 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 RPEL1Q2QD12 228 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 NMSQ5H8A3 153 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 ZNF788Q6ZQV5 615 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 MMD2Q8IY49 270 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 C7orf61Q8IZ16 206 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 OR2T6Q8NHC8 308 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 OCC1Q8TAD7 63 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 TSKUQ8WUA8 353 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 FAM216AQ8WUB2 273 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 ABHD14BQ96IU4 210 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 Q96M66 194 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 GUCD1Q96NT3 240 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 VN1R3Q9BXE9 311 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 IL36BQ9NZH7 164 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 RARRES3Q9UL19 164 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 INSL6Q9Y581 213 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 LHFPL6Q9Y693 200 aa3.59□□□□□ -1.83
VPS50-210ENST00000471188 C5orf42Q9H799 3197 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 OBSL1O75147 1896 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 PCDH15Q96QU1 1955 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.59□□□□□ -1.84
VPS50-210ENST00000471188 PPIAL4CA0A0B4J2A2 164 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 A0A0G2JRQ6 117 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 C5orf63A6NC05 138 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 CCL16O15467 120 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 HCRTR1O43613 425 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 CD5LO43866 347 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 PDE6DO43924 150 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 TNFSF15O95150 251 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 PPIAL4GP0DN37 164 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 CD38P28907 300 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 WASP42768 502 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 ZNF157P51786 506 aaPredicted RBP3.59□□□□□ -1.84
VPS50-210ENST00000471188 SLAQ13239 276 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 GPM6BQ13491 265 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 FAM131CQ96AQ9 280 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 OR8B2Q96RD0 313 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 TM2D1Q9BX74 207 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 MOB1AQ9H8S9 216 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 CHODLQ9H9P2 273 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 GPR27Q9NS67 375 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 Q9Y3F1 56 aa3.59□□□□□ -1.84
VPS50-210ENST00000471188 SZT2Q5T011 3432 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms