RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 NDUFS8O00217 210 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 EGR1P18146 543 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 NPPCP23582 126 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 DPTQ07507 201 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 GFI1BQ5VTD9 330 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 DMRTA1Q5VZB9 504 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 PGLYRP3Q96LB9 341 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 OR2H1Q9GZK4 316 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 UBR3Q6ZT12 1888 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 A0A0U1RRA0 63 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 ZIC3O60481 467 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 DDTP30046 118 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 EFNB1P98172 346 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 APOBEC4Q8WW27 367 aaKnown RBP5.98□□□□□ -1.45
BRCA1-210ENST00000471181 CCL19Q99731 98 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 WNT10AQ9GZT5 417 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 LAMTOR3Q9UHA4 124 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 TRAV2A0A0B4J234 112 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 TRAV24A0A0B4J272 114 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 VWC2LB2RUY7 222 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 ZNHIT1O43257 154 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 SUMO4Q6EEV6 95 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 PCSK4Q6UW60 755 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 RTN4RL2Q86UN3 420 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 VKORC1L1Q8N0U8 176 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 SSBP3Q9BWW4 388 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-210ENST00000471181 EIF3GO75821 320 aaKnown RBP eCLIP5.98□□□□□ -1.45
BRCA1-210ENST00000471181 ATP5LO75964 103 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 TOMM40O96008 361 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 HBDP02042 147 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 C12orf73Q69YU5 71 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 RIMKLAQ8IXN7 391 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 FDCSPQ8NFU4 85 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 MEGF9Q9H1U4 602 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 OR51M1Q9H341 326 aa5.98□□□□□ -1.45
BRCA1-210ENST00000471181 C7orf66A4D0T2 115 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 C19orf67A6NJJ6 358 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 TRA2AQ13595 282 aaKnown RBP eCLIP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 ACSF3Q4G176 576 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 LINC00299Q6ZSB3 139 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 ZBTB34Q8NCN2 500 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 NEUROG1Q92886 237 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 SEMA5BQ9P283 1151 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 ASB1Q9Y576 335 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 GOLGA4Q13439 2230 aaKnown RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 J3QT63 122 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 NAPSAO96009 420 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 HSPB1P04792 205 aaKnown RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 ARL14EPLP0DKL9 152 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 PEAR1Q5VY43 1037 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 Q6ZS52 159 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 NIT1Q86X76 327 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 MS4A3Q96HJ5 214 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 C14orf144Q96I85 54 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 PLSCR2Q9NRY7 297 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 TMEM74BQ9NUR3 256 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 SIGLEC7Q9Y286 467 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 PSCAO43653 123 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 CEACAM5P06731 702 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 H1FOOQ8IZA3 346 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 STPG2Q8N412 459 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 SPEM1Q8N4L4 309 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 CITED1Q99966 193 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 OPN3Q9H1Y3 402 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 DDX60Q8IY21 1712 aaKnown RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 IGHV3-64A0A075B6Q5 118 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 PLPP2O43688 288 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 CRYBB3P26998 211 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 C1orf185Q5T7R7 199 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 FAM71F2Q6NXP2 309 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 PAQR9Q6ZVX9 377 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 TRAV30A0A087WSZ9 112 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 INS-IGF2F8WCM5 200 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 INSP01308 110 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 APOHP02749 345 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 LINC00158P58513 81 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 SURF2Q15527 256 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-210ENST00000471181 LINC00596Q86U02 117 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 ORAOV1Q8WV07 137 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 MS4A6AQ9H2W1 248 aa5.97□□□□□ -1.45
BRCA1-210ENST00000471181 A0A1W2PP11 408 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 LILRA5A6NI73 299 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 H3BUT2 72 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 CRYBB2P43320 205 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 RPL8P62917 257 aaKnown RBP5.96□□□□□ -1.45
BRCA1-210ENST00000471181 DCAF10Q5QP82 559 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 LHFPL4Q7Z7J7 247 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 C17orf47Q8NEP4 570 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 REPIN1Q9BWE0 567 aaKnown RBP5.96□□□□□ -1.45
BRCA1-210ENST00000471181 CLEC7AQ9BXN2 247 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 S4R3C0 116 aa5.96□□□□□ -1.45
BRCA1-210ENST00000471181 CLPSL1A2RUU4 121 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 LIPFP07098 398 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 LTBRP36941 435 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 C1orf122Q6ZSJ8 110 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 SPNS2Q8IVW8 549 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 FNDC4Q9H6D8 234 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-210ENST00000471181 PDLIM7Q9NR12 457 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 IGHV5-51A0A0C4DH38 117 aa5.96□□□□□ -1.46
BRCA1-210ENST00000471181 SIGLEC5O15389 551 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms