RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 LRRC30A6NM36 301 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 C15orf61A6NNL5 157 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 CEACAM18A8MTB9 384 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 H3BMH7 237 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SH2D1BO14796 132 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 RAMP1O60894 148 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 MPDU1O75352 247 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 GRAP2O75791 330 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 ATP5LO75964 103 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 GPANK1O95872 356 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SOD1P00441 154 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 WNT1P04628 370 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 HSPB1P04792 205 aaKnown RBP4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SBK3P0C264 359 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 MED14OSP0DP75 135 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 VPREB1P12018 145 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 IFITM1P13164 125 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 EPCAMP16422 314 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 ELK1P19419 428 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 WT1P19544 449 aaPredicted RBP4.28□□□□□ -1.72
COL3A1-205ENST00000470167 BCL3P20749 454 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 ACRV1P26436 265 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 REG1BP48304 166 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SLC25A1P53007 311 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 HILS1P60008 231 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 RPL15P61313 204 aaKnown RBP4.28□□□□□ -1.72
COL3A1-205ENST00000470167 HLA-DRB3P79483 266 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 DIAPH2-AS1Q14236 149 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 IL13RA2Q14627 380 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 RNPS1Q15287 305 aaKnown RBP4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SPHARQ15513 63 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SLC25A35Q3KQZ1 300 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF260Q3ZCT1 412 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF672Q499Z4 452 aaPredicted RBP4.28□□□□□ -1.72
COL3A1-205ENST00000470167 CDC42EP5Q6NZY7 148 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 GOLT1AQ6ZVE7 132 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SMIM5Q71RC9 77 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 ZNF615Q8N8J6 731 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 NFAM1Q8NET5 270 aaPredicted RBP4.28□□□□□ -1.72
COL3A1-205ENST00000470167 OR52P1PQ8NH57 321 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 VSTM2AQ8TAG5 236 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 TIMD4Q96H15 378 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 KIR2DL4Q99706 377 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 SSBP3Q9BWW4 388 aaPredicted RBP4.28□□□□□ -1.72
COL3A1-205ENST00000470167 TMEM222Q9H0R3 208 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 OR10A2Q9H208 303 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 PELI2Q9HAT8 420 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 HRASLS2Q9NWW9 162 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 AK3Q9UIJ7 227 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 PROCRQ9UNN8 238 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 FZD1Q9UP38 647 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 INSIG2Q9Y5U4 225 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 HEBP2Q9Y5Z4 205 aa4.28□□□□□ -1.72
COL3A1-205ENST00000470167 AHDC1Q5TGY3 1603 aaPredicted RBP4.28□□□□□ -1.72
COL3A1-205ENST00000470167 NRKQ7Z2Y5 1582 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 NUP188Q5SRE5 1749 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 UBR1Q8IWV7 1749 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 TRANK1O15050 2925 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 TMEM272A0A1B0GTI8 110 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 RBFOX3A6NFN3 312 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 FAM90A26D6RGX4 464 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 PLPP1O14494 284 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 CHEK1O14757 476 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 TTRP02766 147 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 IL3P08700 152 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 IGLC6P0CF74 106 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 MYOD1P15172 320 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF37AP17032 561 aaPredicted RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 IGFBP3P17936 291 aaPredicted RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 APOBEC1P41238 236 aaKnown RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 KIR2DS2P43631 304 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 TGFBR3Q03167 851 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 VGLL4Q14135 290 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 IZUMO4Q1ZYL8 232 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 CLEC12BQ2HXU8 276 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 HBMQ6B0K9 141 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 GJB7Q6PEY0 223 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 DPPA3Q6W0C5 159 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 SLC25A48Q6ZT89 311 aaKnown RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 FAM231DQ6ZW35 169 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 OOSP2Q86WS3 158 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF101Q8IZC7 436 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 OR10G6Q8NH81 332 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 JOSD2Q8TAC2 188 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 IL17DQ8TAD2 202 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 OSR1Q8TAX0 266 aaPredicted RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 CMTM2Q8TAZ6 248 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF502Q8TBZ5 544 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 PIFOQ8TCI5 191 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 BORCS7Q96B45 105 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 DYNLL2Q96FJ2 89 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 C9orf85Q96MD7 179 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 VKORC1Q9BQB6 163 aa4.27□□□□□ -1.73
COL3A1-205ENST00000470167 RNASE7Q9H1E1 156 aaKnown RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 TRMT112Q9UI30 125 aaKnown RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 NOP16Q9Y3C1 178 aaKnown RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 SIRT4Q9Y6E7 314 aaPredicted RBP4.27□□□□□ -1.73
COL3A1-205ENST00000470167 R4GN57 208 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms