RNA–Protein interactions for RNA: ENST00000469769.1

THBS3-206, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-206ENST00000469769 TBC1D26Q86UD7 250 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 SGPP2Q8IWX5 399 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 CADM3Q8N126 398 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 OR8H3Q8N146 312 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 LRTM2Q8N967 370 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 ZNF383Q8NA42 475 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 LHX4Q969G2 390 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 C18orf12Q96KH6 178 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 NABP2Q9BQ15 211 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 TMEM160Q9NX00 188 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 SHPKQ9UHJ6 478 aa8.4□□□□□ -1.06
THBS3-206ENST00000469769 MTORP42345 2549 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 TEX13DA0A0J9YY54 714 aaPredicted RBP8.39□□□□□ -1.07
THBS3-206ENST00000469769 C3orf85A0A1B0GTC6 90 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 A0A1W2PPI3 338 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 DBX1A6NMT0 343 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 FAM90A9PA6NNJ1 464 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 RNF212BA8MTL3 300 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 NPFFO15130 113 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 CDS2O95674 445 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 GAPDHP04406 335 aaKnown RBP8.39□□□□□ -1.07
THBS3-206ENST00000469769 IGHV4-38-2P0DP08 117 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 AKR1C4P17516 323 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 SAA4P35542 130 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 CEACAM3P40198 252 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 DIAPH2-AS1Q14236 149 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 TMEM187Q14656 261 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 ZNF585BQ52M93 769 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 GPR157Q5UAW9 335 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 LHFPL4Q7Z7J7 247 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 TEX29Q8N6K0 151 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 CD300LFQ8TDQ1 290 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 ZNF431Q8TF32 576 aaPredicted RBP8.39□□□□□ -1.07
THBS3-206ENST00000469769 MITD1Q8WV92 249 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 TMEM56Q96MV1 263 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 TP53RKQ96S44 253 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 GPHA2Q96T91 129 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 MEGF9Q9H1U4 602 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 KCNS2Q9ULS6 477 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 KCNIP3Q9Y2W7 256 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 TMEM56-RWDD3S4R434 201 aa8.39□□□□□ -1.07
THBS3-206ENST00000469769 A0A0A6YYJ9 748 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 TRAV40A0A0B4J280 105 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 IGHV1-3A0A0C4DH29 117 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 VGLL3A8MV65 326 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 H0YJW9 148 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 M0R1X1 148 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 SMAD7O15105 426 aaKnown RBP8.38□□□□□ -1.07
THBS3-206ENST00000469769 TNFSF12O43508 249 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 OR5AC1P0C628 307 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 RPA2P15927 270 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 HLA-GP17693 338 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 EPHA1P21709 976 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 DYNLT3P51808 116 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 RAB25P57735 213 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 LINC00205P59089 165 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 CATR1Q13166 79 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 CCDC144NLQ6NUI1 221 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 C11orf88Q6PI97 169 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 TGIF2LXQ8IUE1 241 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 DYNAPQ8N1N2 210 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 CFHR4Q92496 578 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 IL22RA2Q969J5 263 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 MRPL20Q9BYC9 149 aaKnown RBP8.38□□□□□ -1.07
THBS3-206ENST00000469769 TMEM222Q9H0R3 208 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 PRDM13Q9H4Q3 707 aa8.38□□□□□ -1.07
THBS3-206ENST00000469769 GPN1Q9HCN4 374 aaPredicted RBP8.38□□□□□ -1.07
THBS3-206ENST00000469769 LIN7CQ9NUP9 197 aaKnown RBP8.38□□□□□ -1.07
THBS3-206ENST00000469769 PIGBOS1A0A0B4J2F0 54 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 IFNA2P01563 188 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 HLA-AP01891 365 aaKnown RBP8.37□□□□□ -1.07
THBS3-206ENST00000469769 RRASP10301 218 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 ANXA3P12429 323 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 CD1BP29016 333 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 MC5RP33032 325 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 KIR2DS2P43631 304 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 LGALS4P56470 323 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 EBI3Q14213 229 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 AANATQ16613 207 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 POU2AF1Q16633 256 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 ANKRD55Q3KP44 614 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 C4orf46Q504U0 113 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 DHRS7BQ6IAN0 325 aaPredicted RBP8.37□□□□□ -1.07
THBS3-206ENST00000469769 LIAT1Q6ZQX7 453 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 DRAXINQ8NBI3 349 aaPredicted RBP8.37□□□□□ -1.07
THBS3-206ENST00000469769 OR52B4Q8NGK2 314 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 NANPQ8TBE9 248 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 CHAC2Q8WUX2 184 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 C17orf50Q8WW18 174 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 RPEQ96AT9 228 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 SEC22CQ9BRL7 303 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 BEX2Q9BXY8 128 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 PLEKHA2Q9HB19 425 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 BEX1Q9HBH7 125 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 NUP50Q9UKX7 468 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 PRELID3BQ9Y3B1 194 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 ALG5Q9Y673 324 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 TNCP24821 2201 aa8.37□□□□□ -1.07
THBS3-206ENST00000469769 DUXBA0A1W2PPF3 345 aa8.36□□□□□ -1.07
THBS3-206ENST00000469769 CREBL2O60519 120 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms