RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 KCNG3Q8TAE7 436 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 NEK7Q8TDX7 302 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 C2CD4CQ8TF44 421 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 TRIM63Q969Q1 353 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 MRPS24Q96EL2 167 aaKnown RBP3.86□□□□□ -1.79
PTPN4-209ENST00000469511 ABHD14BQ96IU4 210 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 ABHD14AQ9BUJ0 271 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 MAGIXQ9H6Y5 334 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 RHOFQ9HBH0 211 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 TAF9BQ9HBM6 251 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 SCRT2Q9NQ03 307 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 MRGBPQ9NV56 204 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 ARL8BQ9NVJ2 186 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF230Q9UIE0 474 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-209ENST00000469511 TRAPPC2LQ9UL33 140 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 RNF150Q9ULK6 438 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 ING4Q9UNL4 249 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 TP53TG1Q9Y2A0 90 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 S4R3C0 116 aa3.86□□□□□ -1.79
PTPN4-209ENST00000469511 TMEM213A2RRL7 107 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 FAM90A23PA8MXZ1 464 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 HMGB1P1B2RPK0 211 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-209ENST00000469511 E9PI62 339 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 SPINT2O43291 252 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 SULT1B1O43704 296 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 SNX3O60493 162 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 CCDC22O60826 627 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 SULT1C4O75897 302 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 IGLV2-23P01705 113 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 CRYGBP07316 175 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 OR2T7P0C7T2 308 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 SERPINA2P20848 420 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 CBLN1P23435 193 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 POLR2IP36954 125 aaKnown RBP3.85□□□□□ -1.79
PTPN4-209ENST00000469511 RBM11P57052 281 aaKnown RBP3.85□□□□□ -1.79
PTPN4-209ENST00000469511 SUMO2P61956 95 aaKnown RBP3.85□□□□□ -1.79
PTPN4-209ENST00000469511 RSU1Q15404 277 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 TATDN3Q17R31 274 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 NXNL2Q5VZ03 156 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 FAM90A2PQ658T7 463 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 C12orf73Q69YU5 71 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 DMKNQ6E0U4 476 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-209ENST00000469511 SIGIRRQ6IA17 410 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 Q6ZWC4 215 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 Q8N1X5 172 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 UXS1Q8NBZ7 420 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 CCDC54Q8NEL0 328 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 OR52N1Q8NH53 320 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 C11orf45Q8TAV5 145 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 TMEM163Q8TC26 289 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 CANT1Q8WVQ1 401 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 SNAPC3Q92966 411 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 FAM46BQ96A09 425 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 FAM192AQ9GZU8 254 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 COA4Q9NYJ1 87 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 TAS2R4Q9NYW5 299 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 RCC2Q9P258 522 aaKnown RBP3.85□□□□□ -1.79
PTPN4-209ENST00000469511 PEMTQ9UBM1 199 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 DHDHQ9UQ10 334 aa3.85□□□□□ -1.79
PTPN4-209ENST00000469511 MYCBP2O75592 4640 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 IGLV2-18A0A075B6J9 118 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 A0A0G2JLM5 398 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 SRRM4A7MD48 611 aaKnown RBP3.84□□□□□ -1.79
PTPN4-209ENST00000469511 H7C2Y5 167 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 YPEL1O60688 119 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 BAG2O95816 211 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 MAS1P04201 325 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 RBMY1A1P0DJD3 496 aaKnown RBP3.84□□□□□ -1.79
PTPN4-209ENST00000469511 RBMY1CP0DJD4 496 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 CD40LGP29965 261 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 SOX2P48431 317 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 MFAP2P55001 183 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 RHOGP84095 191 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 FOXI1Q12951 378 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 EXOSC2Q13868 293 aaKnown RBP3.84□□□□□ -1.79
PTPN4-209ENST00000469511 RBMY1FQ15415 496 aaKnown RBP3.84□□□□□ -1.79
PTPN4-209ENST00000469511 ODF3L2Q3SX64 289 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 MOGAT2Q3SYC2 334 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF57Q68EA5 555 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-209ENST00000469511 BTNL8Q6UX41 500 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 UNQ9165/PRO28630Q6UXU0 137 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 SLC16A13Q7RTY0 426 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 GAPTQ8N292 157 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 PARP16Q8N5Y8 322 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 ZNF383Q8NA42 475 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 ADAD2Q8NCV1 583 aaKnown RBP3.84□□□□□ -1.79
PTPN4-209ENST00000469511 OR5B3Q8NH48 314 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 MRPL30Q8TCC3 161 aaKnown RBP3.84□□□□□ -1.79
PTPN4-209ENST00000469511 CMTM5Q96DZ9 223 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 PELI1Q96FA3 418 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 YPEL2Q96QA6 119 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 GPER1Q99527 375 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 PDCD1LG2Q9BQ51 273 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 ISG20L2Q9H9L3 353 aaKnown RBP3.84□□□□□ -1.79
PTPN4-209ENST00000469511 AASSQ9UDR5 926 aa3.84□□□□□ -1.79
PTPN4-209ENST00000469511 IGHV4-4A0A075B6R2 117 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.83□□□□□ -1.8
PTPN4-209ENST00000469511 TRBV9A0A0B4J1U6 114 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 LINC00473A8K010 186 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 H0YIZ8 118 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms