RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 HBG1P69891 147 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 HBG2P69892 147 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 TFF3Q07654 80 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 C22orf34Q6ZV56 151 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 BHLHA15Q7RTS1 189 aaPredicted RBP14.9□□□□□ -0.02
MCF2L-221ENST00000469415 TGIF2LYQ8IUE0 185 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 ZNF645Q8N7E2 425 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 NECAP1Q8NC96 275 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 CA5BP1Q8WTZ4 195 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 LHX4Q969G2 390 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 SDSLQ96GA7 329 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 IGHG3P01860 377 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 SEM1Q6ZVN7 128 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 RPUSD4Q96CM3 377 aaKnown RBP14.9□□□□□ -0.02
MCF2L-221ENST00000469415 OR2V2Q96R30 315 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 HINT2Q9BX68 163 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 AURKAIP1Q9NWT8 199 aaPredicted RBP14.9□□□□□ -0.02
MCF2L-221ENST00000469415 WIPI2Q9Y4P8 454 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 OOEPA6NGQ2 149 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 SLC39A9Q9NUM3 307 aa14.9□□□□□ -0.02
MCF2L-221ENST00000469415 OPN1MWP04001 364 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 OPN1MW2P0DN77 364 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 OPN1MW3P0DN78 364 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 FAM27E3Q08E93 113 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 SMIM21Q3B7S5 101 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 MAP1LC3B2A6NCE7 125 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 M0R1X1 148 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 YIF1AO95070 293 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 CXCL1P09341 107 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 HOXA1P49639 335 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-221ENST00000469415 GCSAMLQ5JQS6 135 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 MAP1LC3BQ9GZQ8 125 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 ZNF71Q9NQZ8 489 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-221ENST00000469415 DCAF16Q9NXF7 216 aa14.89□□□□□ -0.03
MCF2L-221ENST00000469415 DTD1Q8TEA8 209 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 LSM10Q969L4 123 aaKnown RBP14.88□□□□□ -0.03
MCF2L-221ENST00000469415 SNRNP40Q96DI7 357 aaKnown RBP14.88□□□□□ -0.03
MCF2L-221ENST00000469415 SPTAN1Q13813 2472 aaKnown RBP14.88□□□□□ -0.03
MCF2L-221ENST00000469415 COL6A6A6NMZ7 2263 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 KLK10O43240 276 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 FGF7P21781 194 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 CD200P41217 278 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 CATR1Q13166 79 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 KIAA0141Q14154 515 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-221ENST00000469415 ZADH2Q8N4Q0 377 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 TAF15Q92804 592 aaKnown RBP eCLIP14.88□□□□□ -0.03
MCF2L-221ENST00000469415 ZNRD1Q9P1U0 126 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 MIOXQ9UGB7 285 aa14.88□□□□□ -0.03
MCF2L-221ENST00000469415 LMO1P25800 156 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 GPR12P47775 334 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 RPP25LQ8N5L8 163 aaKnown RBP14.87□□□□□ -0.03
MCF2L-221ENST00000469415 SSX3Q99909 188 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 QTRT1Q9BXR0 403 aaKnown RBP14.87□□□□□ -0.03
MCF2L-221ENST00000469415 WDR61Q9GZS3 305 aaKnown RBP14.87□□□□□ -0.03
MCF2L-221ENST00000469415 ZNF318Q5VUA4 2279 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 CYB5BO43169 146 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 TUBG1P23258 451 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 NDUFA6P56556 154 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 ACSM6Q6P461 480 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 ZNF474Q6S9Z5 364 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-221ENST00000469415 PIP4P1Q86T03 277 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 ZNF561Q8N587 486 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 Q8WTZ3 238 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 ITLN1Q8WWA0 313 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 AKAP6Q13023 2319 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 IGKV1D-17A0A075B6S4 117 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 TMEM210A6NLX4 147 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 LRRC30A6NM36 301 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 AQP7O14520 342 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 SPINT2O43291 252 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 TMEM204Q9BSN7 226 aa14.87□□□□□ -0.03
MCF2L-221ENST00000469415 TRAV3A0A0B4J244 114 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 MARCH11A6NNE9 402 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 GNG10P50151 68 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 UBE2G2P60604 165 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.86□□□□□ -0.03
MCF2L-221ENST00000469415 RYDENQ9NUL5 291 aaKnown RBP14.86□□□□□ -0.03
MCF2L-221ENST00000469415 RNF212BA8MTL3 300 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 SLC31A2O15432 143 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 RHEBQ15382 184 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 MSMO1Q15800 293 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 LRRC75BQ2VPJ9 315 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 TVP23CQ96ET8 276 aa14.86□□□□□ -0.03
MCF2L-221ENST00000469415 PROP1O75360 226 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 IFNA10P01566 189 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 HBE1P02100 147 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 CRYAAP02489 173 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 OR9G9P0C7N8 305 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 MYOD1P15172 320 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 COX5AP20674 150 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 ADIRFQ15847 76 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 SLC35E4Q6ICL7 350 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 ZNF737O75373 536 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 CYB5R3P00387 301 aaPredicted RBP14.85□□□□□ -0.03
MCF2L-221ENST00000469415 ZNF134P52741 427 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 FFAR4Q5NUL3 377 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 PRAMEF5Q5TYX0 476 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 GCSAMQ8N6F7 178 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 OR10P1Q8NGE3 313 aa14.85□□□□□ -0.03
MCF2L-221ENST00000469415 HES4Q9HCC6 221 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms