RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 ZMAT5Q9UDW3 170 aaKnown RBP11.46□□□□□ -0.57
COMMD3-206ENST00000468179 ATP6V0E1O15342 81 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 SLC22A5O76082 557 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 PSMB8P28062 276 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 CD40LGP29965 261 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 RTL8BQ17RB0 113 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 ZNF260Q3ZCT1 412 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 MRPL41Q8IXM3 137 aaKnown RBP11.45□□□□□ -0.58
COMMD3-206ENST00000468179 ZNF383Q8NA42 475 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 DRAXINQ8NBI3 349 aaPredicted RBP11.45□□□□□ -0.58
COMMD3-206ENST00000468179 MAFIPQ8WZ33 124 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 FBXL15Q9H469 300 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 SLC35D1Q9NTN3 355 aa11.45□□□□□ -0.58
COMMD3-206ENST00000468179 METTL1Q9UBP6 276 aaKnown RBP11.45□□□□□ -0.58
COMMD3-206ENST00000468179 MEGF8Q7Z7M0 2845 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 CCL24O00175 119 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 AIREO43918 545 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 PROP1O75360 226 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 CLEC2LP0C7M8 214 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 PPIFP30405 207 aaKnown RBP11.44□□□□□ -0.58
COMMD3-206ENST00000468179 CX3CL1P78423 397 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 PSG5Q15238 335 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 CNIH2Q6PI25 160 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 H1FOOQ8IZA3 346 aaPredicted RBP11.44□□□□□ -0.58
COMMD3-206ENST00000468179 ABHD5Q8WTS1 349 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 C4orf3Q8WVX3 66 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 RBMXL1Q96E39 390 aaKnown RBP11.44□□□□□ -0.58
COMMD3-206ENST00000468179 RNF167Q9H6Y7 350 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 SDHAF2Q9NX18 166 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 WSB1Q9Y6I7 421 aa11.44□□□□□ -0.58
COMMD3-206ENST00000468179 TMEM235A6NFC5 223 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 LUMP51884 338 aaPredicted RBP11.43□□□□□ -0.58
COMMD3-206ENST00000468179 CRIP2P52943 208 aaPredicted RBP11.43□□□□□ -0.58
COMMD3-206ENST00000468179 FOXB2Q5VYV0 432 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 PYHIN1Q6K0P9 492 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 ETV3LQ6ZN32 361 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 MINDY2Q8NBR6 621 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 UBE2E2Q96LR5 201 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 P2RX4Q99571 388 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 SPATA2Q9UM82 520 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 VWFP04275 2813 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 PLXNB1O43157 2135 aa11.43□□□□□ -0.58
COMMD3-206ENST00000468179 TRAV18A0A075B6X5 111 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 G3V318 75 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 IGLV1-40P01703 118 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 IGKV1-16P04430 117 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 AKIRIN2Q53H80 203 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 LCNL1Q6ZST4 164 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 C18orf65Q6ZTR6 163 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 OR5M8Q8NGP6 311 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 NUDCD2Q8WVJ2 157 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 S100A16Q96FQ6 103 aaKnown RBP11.42□□□□□ -0.58
COMMD3-206ENST00000468179 ANXA10Q9UJ72 324 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 ELF5Q9UKW6 265 aaPredicted RBP11.42□□□□□ -0.58
COMMD3-206ENST00000468179 FOXA2Q9Y261 457 aaPredicted RBP11.42□□□□□ -0.58
COMMD3-206ENST00000468179 VSIG4Q9Y279 399 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 OR2W1Q9Y3N9 320 aa11.42□□□□□ -0.58
COMMD3-206ENST00000468179 CBX5P45973 191 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 RAB9AP51151 201 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 RAB25P57735 213 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 ARPC4P59998 168 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 ECSCRQ19T08 205 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 C4orf48Q5BLP8 95 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 LCE2CQ5TA81 110 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 ZNF645Q8N7E2 425 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 OR5H6Q8NGV6 325 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 MRAPQ8TCY5 172 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 YIPF6Q96EC8 236 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 RAX2Q96IS3 184 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 CLCC1Q96S66 551 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 PRELID3BQ9Y3B1 194 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 NUBP2Q9Y5Y2 271 aa11.41□□□□□ -0.58
COMMD3-206ENST00000468179 IGKV1D-8A0A087WSZ0 117 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 A0A1W2PN81 502 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 FCN1O00602 326 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 SHOXO15266 292 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 SLC25A17O43808 307 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 CNIH1O95406 144 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 CA2P00918 260 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 HLA-DQB1P01920 261 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 CHRNA7P36544 502 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 RUNX1Q01196 453 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 VMA21Q3ZAQ7 101 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 TMEM177Q53S58 311 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 ACTBL2Q562R1 376 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 UNQ5815/PRO19632Q6UWF5 114 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 ZNF491Q8N8L2 437 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 BVESQ8NE79 360 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 MYOZ3Q8TDC0 251 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 ARPC1AQ92747 370 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 SLC25A38Q96DW6 304 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 HARBI1Q96MB7 349 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 TMEM68Q96MH6 324 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 AURKAIP1Q9NWT8 199 aaPredicted RBP11.4□□□□□ -0.58
COMMD3-206ENST00000468179 A3GALT2U3KPV4 340 aa11.4□□□□□ -0.58
COMMD3-206ENST00000468179 SSX5O60225 188 aa11.39□□□□□ -0.59
COMMD3-206ENST00000468179 CREBL2O60519 120 aaPredicted RBP11.39□□□□□ -0.59
COMMD3-206ENST00000468179 PRB2P02812 416 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms