RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 OR52I2Q8NH67 350 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 WIPF2Q8TF74 440 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-205ENST00000465238 SDHAF2Q9NX18 166 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 EHFQ9NZC4 300 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 MOB4Q9Y3A3 225 aa14.08□□□□□ -0.16
COL7A1-205ENST00000465238 FABP12A6NFH5 140 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 OR5H14A6NHG9 310 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 NCBP2LA6PVI3 153 aaKnown RBP14.07□□□□□ -0.16
COL7A1-205ENST00000465238 PROP1O75360 226 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 TUSC2O75896 110 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 SLC22A5O76082 557 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 CD28P10747 220 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 AADACP22760 399 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 RFX2P48378 723 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 ACTBP60709 375 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 BLCAPP62952 87 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 ARSJQ5FYB0 599 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-205ENST00000465238 OVCH2Q7RTZ1 564 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 OR4F17Q8NGA8 305 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 OR8H1Q8NGG4 311 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 GIMAP1Q8WWP7 306 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 OR4F4Q96R69 305 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 WNT10AQ9GZT5 417 aa14.07□□□□□ -0.16
COL7A1-205ENST00000465238 GABARAPH6UMI1 98 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 H7C2Y5 167 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 HRH1P35367 487 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 DYRK1AQ13627 763 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 FOXB2Q5VYV0 432 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 FAM131AQ6UXB0 335 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 Q8N6K4 173 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 ZNF645Q8N7E2 425 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 OR5AN1Q8NGI8 311 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 KLK11Q9UBX7 282 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 MTFP1Q9UDX5 166 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 WASHC3Q9Y3C0 194 aa14.06□□□□□ -0.16
COL7A1-205ENST00000465238 IGKV1D-13A0A0B4J2D9 117 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 H0YJW9 148 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 CTDSPLO15194 276 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 FGF16O43320 207 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 PPYP01298 95 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 APOA2P02652 100 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 IGKV1-13P0DP09 117 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 VDAC2P45880 294 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-205ENST00000465238 HERV-K104P61576 105 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 TSPAN5P62079 268 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 DGCR2P98153 550 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 ABCA11PQ4W5N1 156 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 ACTBL2Q562R1 376 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 C9orf152Q5JTZ5 239 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 DHRS11Q6UWP2 260 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 OR6F1Q8NGZ6 308 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 SECTM1Q8WVN6 248 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 R3HDM4Q96D70 268 aa14.05□□□□□ -0.16
COL7A1-205ENST00000465238 CITED2Q99967 270 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-205ENST00000465238 THBS3P49746 956 aa14.04□□□□□ -0.16
COL7A1-205ENST00000465238 FXYD4P59646 89 aa14.04□□□□□ -0.16
COL7A1-205ENST00000465238 TAGLNQ01995 201 aaKnown RBP14.04□□□□□ -0.16
COL7A1-205ENST00000465238 SSBP1Q04837 148 aaKnown RBP14.04□□□□□ -0.16
COL7A1-205ENST00000465238 C5orf56Q8N8D9 126 aa14.04□□□□□ -0.16
COL7A1-205ENST00000465238 ZNF383Q8NA42 475 aa14.04□□□□□ -0.16
COL7A1-205ENST00000465238 RBMXL1Q96E39 390 aaKnown RBP14.04□□□□□ -0.16
COL7A1-205ENST00000465238 ADTRPQ96IZ2 230 aa14.04□□□□□ -0.16
COL7A1-205ENST00000465238 ZNF2Q9BSG1 426 aaPredicted RBP14.04□□□□□ -0.16
COL7A1-205ENST00000465238 SLC5A7Q9GZV3 580 aa14.04□□□□□ -0.16
COL7A1-205ENST00000465238 ADARB2-AS1A8MUL3 147 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 AMY1AP04745 511 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 AMY2AP04746 511 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 IFNA6P05013 189 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 LINC00205P59089 165 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 CBX3Q13185 183 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 MMDQ15546 238 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 OXLD1Q5BKU9 147 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 Q6ZS46 218 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 SMIM4Q8WVI0 70 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 C5orf30Q96GV9 206 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 RASL11BQ9BPW5 248 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 SOSTQ9BQB4 213 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 CCL28Q9NRJ3 127 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 PLSCR3Q9NRY6 295 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 SLC35D1Q9NTN3 355 aa14.03□□□□□ -0.16
COL7A1-205ENST00000465238 RBMX2Q9Y388 322 aaKnown RBP14.03□□□□□ -0.16
COL7A1-205ENST00000465238 A6NHS1 94 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 SH2D7A6NKC9 451 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-205ENST00000465238 PRB2P02812 416 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-205ENST00000465238 TBPP20226 339 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 DUTP33316 252 aaKnown RBP14.02□□□□□ -0.17
COL7A1-205ENST00000465238 F2RL1P55085 397 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 TAS2R19P59542 299 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 RPS16P62249 146 aaKnown RBP14.02□□□□□ -0.17
COL7A1-205ENST00000465238 MSMO1Q15800 293 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 RTL8BQ17RB0 113 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 RNASE10Q5GAN6 216 aaKnown RBP14.02□□□□□ -0.17
COL7A1-205ENST00000465238 TMEM17Q86X19 198 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 PDPNQ86YL7 162 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 TMEM229BQ8NBD8 167 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 BORCS5Q969J3 196 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 RITA1Q96K30 269 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 RNF5Q99942 180 aa14.02□□□□□ -0.17
COL7A1-205ENST00000465238 KIAA1456Q9P272 454 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms