RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CCL3P10147 92 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 CRYBB3P26998 211 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 SNAP25P60880 206 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 GNA13Q14344 377 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 LGALS9CQ6DKI2 356 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 AMTNQ6UX39 209 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 C2orf91Q6ZV80 131 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 Q8N402 240 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 CMTM5Q96DZ9 223 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 MIEN1Q9BRT3 115 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 LLPHQ9BRT6 129 aaKnown RBP1.67□□□□□ -2.14
CLK1-208ENST00000464454 DRC3Q9H069 523 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 PCYT1BQ9Y5K3 369 aaPredicted RBP1.67□□□□□ -2.14
CLK1-208ENST00000464454 ATP6V1DQ9Y5K8 247 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 STRCP1A6NGW2 1772 aa1.67□□□□□ -2.14
CLK1-208ENST00000464454 SLX4Q8IY92 1834 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 DICER1Q9UPY3 1922 aaKnown RBP1.66□□□□□ -2.14
CLK1-208ENST00000464454 DSCAMO60469 2012 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 C5orf49A4QMS7 147 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 OR5K4A6NMS3 321 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 OR11H12B2RN74 326 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 J3QKU1 62 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 SSNA1O43805 119 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 NIPSNAP2O75323 286 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 S1PR2O95136 353 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 MT-CO2P00403 227 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 S100A6P06703 90 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 HOXA6P31267 233 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 SERPINB10P48595 397 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 CDC34P49427 236 aaPredicted RBP1.66□□□□□ -2.14
CLK1-208ENST00000464454 ZNF140P52738 457 aaPredicted RBP1.66□□□□□ -2.14
CLK1-208ENST00000464454 EMP2P54851 167 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 TMEM33P57088 247 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 CXCR4P61073 352 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 HLA-DRB3P79483 266 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 DEFB103AP81534 67 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.66□□□□□ -2.14
CLK1-208ENST00000464454 N4BP2L1Q5TBK1 243 aaPredicted RBP1.66□□□□□ -2.14
CLK1-208ENST00000464454 C1orf174Q8IYL3 243 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 LRRC34Q8IZ02 419 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 OR11H2Q8NH07 326 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 KLF6Q99612 283 aaPredicted RBP1.66□□□□□ -2.14
CLK1-208ENST00000464454 TTTY12Q9BZ98 90 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 DERL2Q9GZP9 239 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 SLC2A9Q9NRM0 540 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 MYO3BQ8WXR4 1341 aa1.66□□□□□ -2.14
CLK1-208ENST00000464454 IGHV3-15A0A0B4J1V0 119 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 OVOL1O14753 267 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 NDUFB2O95178 105 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 IGHV1-69P01742 117 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 IFI30P13284 250 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 CDK9P50750 372 aaKnown RBP1.65□□□□□ -2.15
CLK1-208ENST00000464454 RPS24P62847 133 aaKnown RBP1.65□□□□□ -2.15
CLK1-208ENST00000464454 COTL1Q14019 142 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 TNFAIP8L2Q6P589 184 aaPredicted RBP1.65□□□□□ -2.15
CLK1-208ENST00000464454 FAM151BQ6UXP7 276 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 GLT6D1Q7Z4J2 308 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 CNEP1R1Q8N9A8 125 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 RNASE11Q8TAA1 199 aaKnown RBP1.65□□□□□ -2.15
CLK1-208ENST00000464454 FGF13Q92913 245 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 MRPS24Q96EL2 167 aaKnown RBP1.65□□□□□ -2.15
CLK1-208ENST00000464454 ANKRD36BP1Q96IX9 119 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 Q9BRP9 147 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 ZNF471Q9BX82 626 aaPredicted RBP1.65□□□□□ -2.15
CLK1-208ENST00000464454 PECRQ9BY49 303 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 HES4Q9HCC6 221 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 NKIRAS1Q9NYS0 192 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 PLCH2O75038 1416 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 NAV1Q8NEY1 1877 aa1.65□□□□□ -2.15
CLK1-208ENST00000464454 COL5A3P25940 1745 aaPredicted RBP1.64□□□□□ -2.15
CLK1-208ENST00000464454 C11orf86A6NJI1 115 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 H3BRN7 92 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 GNRH2O43555 120 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 APOEP02649 317 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 IGKV1-16P04430 117 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 OCM2P0CE71 109 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 COX5BP10606 129 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 DDTP30046 118 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 HOXC5Q00444 222 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 SLC36A2Q495M3 483 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 NAA40Q86UY6 237 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 SLC35F6Q8N357 371 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 ZNF283Q8N7M2 679 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 OR4X1Q8NH49 305 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 RPS4Y2Q8TD47 263 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 EEF1AKMT1Q8WVE0 214 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 ITFG2Q969R8 447 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 TMEM109Q9BVC6 243 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 IL20Q9NYY1 176 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 ADGRB3O60242 1522 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 VWDEQ8N2E2 1590 aa1.64□□□□□ -2.15
CLK1-208ENST00000464454 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 KDM5BQ9UGL1 1544 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 OR6C6A6NF89 314 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 C2orf74A8MZ97 194 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 PFDN6O15212 129 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 C8orf88P0DMB2 117 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 ALOX5APP20292 161 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 XCL1P47992 114 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 HINT1P49773 126 aaPredicted RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms