RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 RBPJQ06330 500 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 ATP6V1FQ16864 119 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 FAM166AQ6J272 317 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 DMRTA2Q96SC8 542 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 SH2D2AQ9NP31 389 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 SIRT7Q9NRC8 400 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 PITPNC1Q9UKF7 332 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 COLQQ9Y215 455 aaPredicted RBP7.75□□□□□ -1.17
HPS4-208ENST00000464362 GRIFINA4D1Z8 144 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 SCGB2A1O75556 95 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 UMODP07911 640 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 CT45A10P0DMU9 189 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 OR1L4Q8NGR5 311 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 SMIM8Q96KF7 97 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 GINS3Q9BRX5 216 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 OPN3Q9H1Y3 402 aaPredicted RBP7.75□□□□□ -1.17
HPS4-208ENST00000464362 ACACBO00763 2458 aa7.75□□□□□ -1.17
HPS4-208ENST00000464362 DENND4CQ5VZ89 1909 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 LOC390937A0A1W2PQ73 354 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 CYB5R3P00387 301 aaPredicted RBP7.74□□□□□ -1.17
HPS4-208ENST00000464362 SERF2P84101 59 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 FAM201AQ5SY85 155 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 EIF4E3Q8N5X7 224 aaKnown RBP7.74□□□□□ -1.17
HPS4-208ENST00000464362 ARFGEF3Q5TH69 2177 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 PIEZO2Q9H5I5 2752 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 LRRC3CA6NJW4 275 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 MKRN2OSH3BPM6 223 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 NDUFB3O43676 98 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 GZMHP20718 246 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 HNRNPA3P51991 378 aaKnown RBP7.74□□□□□ -1.17
HPS4-208ENST00000464362 TCTAP57738 103 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 BPIFB3P59826 476 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 AARDQ4LEZ3 155 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 GFRALQ6UXV0 394 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 NHLRC2Q8NBF2 726 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 TMEM54Q969K7 222 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 GALNT14Q96FL9 552 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 CYYR1Q96J86 154 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 CCL13Q99616 98 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 GGACTQ9BVM4 153 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 TM2D1Q9BX74 207 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 WFDC1Q9HC57 220 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 TECRQ9NZ01 308 aaKnown RBP7.74□□□□□ -1.17
HPS4-208ENST00000464362 OR6C3Q9NZP0 311 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 SLC45A2Q9UMX9 530 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 THSD7BQ9C0I4 1608 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 B4DEV8 164 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 F8VVB4 439 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 F8VWA3 439 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 CD55P08174 381 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 PKIAP61925 76 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 ZNF441Q8N8Z8 693 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 ZNRF1Q8ND25 227 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 HARBI1Q96MB7 349 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 FAM117AQ9C073 453 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 PARLQ9H300 379 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 PXMP4Q9Y6I8 212 aa7.74□□□□□ -1.17
HPS4-208ENST00000464362 PQLC2LA1A4F0 135 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 PRR19A6NJB7 356 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 J3QR06 171 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 LDLRAD4O15165 306 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 TCF21O43680 179 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 CELA3BP08861 270 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 TNFRSF1AP19438 455 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 FCER1GP30273 86 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 TNFRSF9Q07011 255 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 MAJINQ3KP22 176 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 TBX15Q96SF7 602 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 MANBALQ9NQG1 85 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 FOXJ2Q9P0K8 574 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 ELOA3CA0A087WX78 387 aaPredicted RBP7.73□□□□□ -1.17
HPS4-208ENST00000464362 MARCH11A6NNE9 402 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 E9PLN8 166 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 H3BTX0 84 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 STARD6P59095 220 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 RANP62826 216 aaKnown RBP7.73□□□□□ -1.17
HPS4-208ENST00000464362 FXYD3Q14802 87 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 OR1B1Q8NGR6 318 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 KLF14Q8TD94 323 aaPredicted RBP7.73□□□□□ -1.17
HPS4-208ENST00000464362 IMMP1LQ96LU5 166 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 OR2V2Q96R30 315 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 BARX1Q9HBU1 254 aaPredicted RBP7.73□□□□□ -1.17
HPS4-208ENST00000464362 CYTL1Q9NRR1 136 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 DEPPQ9NTK1 212 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 HELTA6NFD8 242 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 SRSF10O75494 262 aaKnown RBP7.73□□□□□ -1.17
HPS4-208ENST00000464362 CLEC3BP05452 202 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 HOXA6P31267 233 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 ZNF137PP52743 207 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 FAM214BQ7L5A3 538 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 SLC24A4Q8NFF2 622 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 NOL4LQ96MY1 436 aaPredicted RBP7.73□□□□□ -1.17
HPS4-208ENST00000464362 NUDT16L1Q9BRJ7 211 aaKnown RBP7.73□□□□□ -1.17
HPS4-208ENST00000464362 NCOA6Q14686 2063 aaPredicted RBP7.73□□□□□ -1.17
HPS4-208ENST00000464362 ZGRF1Q86YA3 2104 aa7.73□□□□□ -1.17
HPS4-208ENST00000464362 IGKV1-27A0A075B6S5 117 aa7.72□□□□□ -1.17
HPS4-208ENST00000464362 CYC1P08574 325 aa7.72□□□□□ -1.17
HPS4-208ENST00000464362 DDTP30046 118 aa7.72□□□□□ -1.17
HPS4-208ENST00000464362 TNXAQ16473 311 aa7.72□□□□□ -1.17
HPS4-208ENST00000464362 MRPL14Q6P1L8 145 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms