RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SSBP2P81877 361 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 FOXL1Q12952 345 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 GOLGA4Q13439 2230 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 CD226Q15762 336 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ACSF3Q4G176 576 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 DMRTC1Q5HYR2 192 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 CXorf66Q5JRM2 361 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 RALGAPA1Q6GYQ0 2036 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 DHRS13Q6UX07 377 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 RFLNAQ6ZTI6 216 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MARCH3Q86UD3 253 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 CDC20BQ86Y33 519 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PPP1R35Q8TAP8 253 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 LHX4Q969G2 390 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SPATA33Q96N06 139 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MOB1AQ9H8S9 216 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PELI2Q9HAT8 420 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ST20Q9HBF5 79 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF286AQ9HBT8 521 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 BCL2L10Q9HD36 194 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 FAM60AQ9NP50 221 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MMP25Q9NPA2 562 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 NAT8BQ9UHF3 227 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ERG28Q9UKR5 140 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 CES1P1Q9UKY3 287 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SPTBN5Q9NRC6 3674 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 IGKV6D-21A0A0A0MT36 114 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MDFIC2A0A1B0GVS7 189 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 H0Y980 276 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 M0R2Z0 102 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PLPP1O14494 284 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SOCS1O15524 211 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 LATO43561 262 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PITX3O75364 302 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 VENTXO95231 258 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 UTS2O95399 124 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 CER1O95813 267 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 TGFAP01135 160 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 CRYAAP02489 173 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 HIST1H1DP16402 221 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 CXCL12P48061 93 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PSMB3P49720 205 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 RPS4XP62701 263 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 GNG3P63215 75 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 DEFB103AP81534 67 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF117Q03924 483 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 EGR4Q05215 589 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 FMODQ06828 376 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 UNC119Q13432 240 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF726P1Q15940 193 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 IGFBP7Q16270 282 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MFSD12Q6NUT3 480 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 PET117Q6UWS5 81 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SH2D6Q7Z4S9 175 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 SPATA12Q7Z6I5 190 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF611Q8N823 705 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF418Q8TF45 676 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 EMG1Q92979 244 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF501Q96CX3 271 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 C4orf45Q96LM5 186 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 MCRIP2Q9BUT9 160 aaKnown RBP3.06□□□□□ -1.92
COL8A1-205ENST00000463753 C1QTNF4Q9BXJ3 329 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 WDR76Q9H967 626 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 NCOR1O75376 2440 aa3.06□□□□□ -1.92
COL8A1-205ENST00000463753 GTF3C1Q12789 2109 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 IGKV6-21A0A0C4DH24 114 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 FEZF1A0PJY2 475 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 OR4C46A6NHA9 309 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 C9orf118A6NHY6 69 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 F5H5K5 113 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 J3QR06 171 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 SIRPB1O00241 398 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 SLC17A3O00476 420 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 RAD51DO75771 328 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 NDUFB2O95178 105 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 PRTN3P24158 256 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 HOXD9P28356 352 aaPredicted RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 SRIP30626 198 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 GPR183P32249 361 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 RHOAP61586 193 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 B4GALNT1Q00973 533 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 CATR1Q13166 79 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 GGTLC2Q14390 218 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 MEP1BQ16820 701 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 PLAC9Q5JTB6 97 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF324BQ6AW86 544 aaPredicted RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ACP7Q6ZNF0 438 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 FAM57BQ71RH2 274 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 FA2HQ7L5A8 372 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 AMZ2Q86W34 360 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 CA13Q8N1Q1 262 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 TMEM252Q8N6L7 170 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 MRPL43Q8N983 215 aaKnown RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 SCGB1C1Q8TD33 95 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 PIGTQ969N2 578 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ADAT3Q96EY9 351 aaPredicted RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 GPR82Q96P67 336 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 AGMATQ9BSE5 352 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 EFCAB11Q9BUY7 163 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 MS4A5Q9H3V2 200 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms