RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 UFC1Q9Y3C8 167 aa3.55□□□□□ -1.84
U2AF1-205ENST00000463599 RBM7Q9Y580 266 aaKnown RBP3.55□□□□□ -1.84
U2AF1-205ENST00000463599 SNX10Q9Y5X0 201 aa3.55□□□□□ -1.84
U2AF1-205ENST00000463599 YLPM1P49750 1951 aaKnown RBP3.54□□□□□ -1.84
U2AF1-205ENST00000463599 SNAPC4Q5SXM2 1469 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 CABIN1Q9Y6J0 2220 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 IGLV2-18A0A075B6J9 118 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 IGSF23A1L1A6 192 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 PRORSD1PA6NEY8 169 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 FAM183AA6NL82 134 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 H3BP45 60 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 RPL36A-HNRNPH2H7BZ11 118 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 MFNGO00587 321 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 TP53I11O14683 189 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 MRASO14807 208 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 IFNA17P01571 189 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 IGHV1-46P01743 117 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 SOD3P08294 240 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 GABRA1P14867 456 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 HIST1H1TP22492 207 aaPredicted RBP3.54□□□□□ -1.84
U2AF1-205ENST00000463599 S100A11P31949 105 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 STC1P52823 247 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 TCL1AP56279 114 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 PIGPP57054 158 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 RAB8AP61006 207 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 CKS1BP61024 79 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 GNG3P63215 75 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 IFITM2Q01629 132 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 MOBPQ13875 183 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 CDK10Q15131 360 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 TAF9Q16594 264 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 TMEM97Q5BJF2 176 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 FAM162BQ5T6X4 162 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 HIST2H3PS2Q5TEC6 136 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 DCUN1D2Q6PH85 259 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 HMGN2P46Q86SG4 172 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 ZNF439Q8NDP4 499 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 EEF1AKMT1Q8WVE0 214 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 RBP7Q96R05 134 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 PEBP4Q96S96 227 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 SIGMAR1Q99720 223 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 CALML5Q9NZT1 146 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 LSM5Q9Y4Y9 91 aaKnown RBP3.54□□□□□ -1.84
U2AF1-205ENST00000463599 ZNF706Q9Y5V0 76 aaPredicted RBP3.54□□□□□ -1.84
U2AF1-205ENST00000463599 NUP214P35658 2090 aaPredicted RBP3.54□□□□□ -1.84
U2AF1-205ENST00000463599 CAMSAP1Q5T5Y3 1602 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 TTC37Q6PGP7 1564 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 MAGI1Q96QZ7 1491 aaPredicted RBP3.54□□□□□ -1.84
U2AF1-205ENST00000463599 RAPGEF2Q9Y4G8 1499 aa3.54□□□□□ -1.84
U2AF1-205ENST00000463599 VIRMAQ69YN4 1812 aaKnown RBP3.54□□□□□ -1.84
U2AF1-205ENST00000463599 TGIF2-C20orf24A0A0A6YYL0 155 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 TRAV8-2A0A0B4J237 113 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 C20orf202A1L168 122 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 CLDN24A6NM45 220 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 LGALS9O00182 355 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 FGF16O43320 207 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 MPZL2O60487 215 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 ATG12O94817 140 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 C1QBP02746 253 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 GZMHP20718 246 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 DDTP30046 118 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 IFNGR2P38484 337 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 CD200P41217 278 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 DLX6P56179 175 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 NCALDP61601 193 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 TBPL1P62380 186 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 OR8G1Q15617 311 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 HIST3H3Q16695 136 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 TMEM128Q5BJH2 165 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 CST9Q5W186 159 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 DGAT2L6Q6ZPD8 337 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 C8orf59Q8N0T1 100 aaPredicted RBP3.53□□□□□ -1.84
U2AF1-205ENST00000463599 ZNF615Q8N8J6 731 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 KLF14Q8TD94 323 aaPredicted RBP3.53□□□□□ -1.84
U2AF1-205ENST00000463599 Q8WTZ3 238 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 SFT2D1Q8WV19 159 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 TWIST2Q8WVJ9 160 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 GPR22Q99680 433 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 CMSS1Q9BQ75 279 aaKnown RBP3.53□□□□□ -1.84
U2AF1-205ENST00000463599 FAM206AQ9NX38 181 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 SLC35A3Q9Y2D2 325 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 EIF4G3O43432 1585 aaKnown RBP3.53□□□□□ -1.84
U2AF1-205ENST00000463599 PCF11O94913 1555 aaKnown RBP3.53□□□□□ -1.84
U2AF1-205ENST00000463599 IFT140Q96RY7 1462 aa3.53□□□□□ -1.84
U2AF1-205ENST00000463599 CPSF1Q10570 1443 aaKnown RBP3.53□□□□□ -1.85
U2AF1-205ENST00000463599 ARHGAP31Q2M1Z3 1444 aa3.53□□□□□ -1.85
U2AF1-205ENST00000463599 LINC00862A6NCI5 91 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 K7EPK0 472 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 SYNGR1O43759 233 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 CNMDO75829 334 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 CDRT1O95170 752 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 CA2P00918 260 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 NRASP01111 189 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 HRASP01112 189 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 KRASP01116 189 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 HTR1AP08908 422 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 OR5AC1P0C628 307 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 SPNP16150 400 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 ATF1P18846 271 aa3.52□□□□□ -1.85
U2AF1-205ENST00000463599 PPP3R1P63098 170 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms