RNA–Protein interactions for RNA: ENST00000463421.1

NFX1-204, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 3

Gene NFX1, Length 987 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-204	ENST00000463421	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.24	□□□□□ -0.61
NFX1-204	ENST00000463421	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.24	□□□□□ -0.61
NFX1-204	ENST00000463421	SLC35D1	Q9NTN3	355 aa		11.24	□□□□□ -0.61
NFX1-204	ENST00000463421	SIGLEC8	Q9NYZ4	499 aa		11.24	□□□□□ -0.61
NFX1-204	ENST00000463421	ADAM30	Q9UKF2	790 aa		11.24	□□□□□ -0.61
NFX1-204	ENST00000463421	CEPT1	Q9Y6K0	416 aa		11.24	□□□□□ -0.61
NFX1-204	ENST00000463421	IZUMO1R	A6ND01	250 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	TMEM14DP	A8MWL7	114 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421		M0R1X1	148 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	BRI3	O95415	125 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	TRBV12-3	P01733	135 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	PJVK	Q0ZLH3	352 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	INSL4	Q14641	139 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	RPEL1	Q2QD12	228 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	ACSM3	Q53FZ2	586 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	ZNF343	Q6P1L6	599 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	LRRTM1	Q86UE6	522 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	PHYHIP	Q92561	330 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	FAM110A	Q9BQ89	295 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	PLEKHA3	Q9HB20	300 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421	COA4	Q9NYJ1	87 aa		11.23	□□□□□ -0.61
NFX1-204	ENST00000463421		A0A0A6YYD4	124 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	SOCS1	O15524	211 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	OR2A4	O95047	310 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	SCT	P09683	121 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	CD81	P60033	236 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	QRFP	P83859	136 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	DYRK1A	Q13627	763 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	AHSA2	Q719I0	299 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	OR2K2	Q8NGT1	345 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	USMG5	Q96IX5	58 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	URM1	Q9BTM9	101 aa	Known RBP	11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	LPAR5	Q9H1C0	372 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	HIPK2	Q9H2X6	1198 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421		Q9N2K0	584 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	C12orf4	Q9NQ89	552 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	RDH8	Q9NYR8	311 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421	PEMT	Q9UBM1	199 aa		11.22	□□□□□ -0.61
NFX1-204	ENST00000463421		A0A0B4J203	849 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	TPPP	O94811	219 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	BPNT1	O95861	308 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	IGLV2-23	P01705	113 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	SRM	P19623	302 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	MS4A15	Q8N5U1	240 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	NANOGP1	Q8N7R0	232 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	OR6M1	Q8NGM8	313 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	SNAPC3	Q92966	411 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	HARBI1	Q96MB7	349 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	PHB2	Q99623	299 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	PSORS1C1	Q9UIG5	152 aa		11.21	□□□□□ -0.61
NFX1-204	ENST00000463421	AIRE	O43918	545 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	CRYGB	P07316	175 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	APELA	P0DMC3	54 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	CBX3	Q13185	183 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	HSD17B12	Q53GQ0	312 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	LAX1	Q8IWV1	398 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	DHRSX	Q8N5I4	330 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	NEURL2	Q9BR09	285 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	SLC2A8	Q9NY64	477 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	HSF4	Q9ULV5	492 aa		11.2	□□□□□ -0.62
NFX1-204	ENST00000463421	IGKV1-6	A0A0C4DH72	117 aa		11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	SHOX	O15266	292 aa		11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	SERPINB10	P48595	397 aa		11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	MECP2	P51608	486 aa	Known RBP	11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	P2RY14	Q15391	338 aa		11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	CEACAM19	Q7Z692	300 aa		11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	FAM89B	Q8N5H3	189 aa		11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	CMSS1	Q9BQ75	279 aa	Known RBP	11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	OR2D2	Q9H210	308 aa		11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	PLGRKT	Q9HBL7	147 aa		11.19	□□□□□ -0.62
NFX1-204	ENST00000463421	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	TRDC	B7Z8K6	153 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	MPPED1	O15442	326 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	OR9G9	P0C7N8	305 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	RTL8B	Q17RB0	113 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	CD300E	Q496F6	205 aa	Predicted RBP	11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	TMEM177	Q53S58	311 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	LAIR2	Q6ISS4	152 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	ADAD2	Q8NCV1	583 aa	Known RBP	11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	DYNLRB2	Q8TF09	96 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	ARHGAP5-AS1	Q96IT6	56 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	PECR	Q9BY49	303 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	C8orf4	Q9NR00	106 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	PLCXD1	Q9NUJ7	323 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	SDHAF2	Q9NX18	166 aa		11.18	□□□□□ -0.62
NFX1-204	ENST00000463421	MSGN1	A6NI15	193 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	FAM223B	A6NKX1	122 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	BMPR1B	O00238	502 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	RBMXL2	O75526	392 aa	Known RBP	11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	CD7	P09564	240 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	CD37	P11049	281 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	TMEM50B	P56557	158 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	RHOG	P84095	191 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	TAGLN	Q01995	201 aa	Known RBP	11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	EXOSC2	Q13868	293 aa	Known RBP	11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	TNXA	Q16473	311 aa		11.17	□□□□□ -0.62
NFX1-204	ENST00000463421	RNLS	Q5VYX0	342 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms