RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 GFOD1Q9NXC2 390 aa8.4□□□□□ -1.07
MSH5-211ENST00000463144 HSPB7Q9UBY9 170 aa8.4□□□□□ -1.07
MSH5-211ENST00000463144 TRGV10A0A0A0MS01 117 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.39□□□□□ -1.07
MSH5-211ENST00000463144 LRRC30A6NM36 301 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 FAM90A26D6RGX4 464 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 TMEM178BH3BS89 294 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 RAB29O14966 203 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 METTL15P1P0C7V9 234 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 M6PRP20645 277 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 CASP6P55212 293 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 ADORA2A-AS1P86434 159 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 RUNX1Q01196 453 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 BTN1A1Q13410 526 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 FBXL19-AS1Q494R0 122 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 CORO2AQ92828 525 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 ATP5SQ99766 215 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 SCRT1Q9BWW7 348 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 SAP30LQ9HAJ7 183 aa8.39□□□□□ -1.07
MSH5-211ENST00000463144 M0R1X1 148 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 ITGB1BP1O14713 200 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 TNFRSF13BO14836 293 aaPredicted RBP8.38□□□□□ -1.07
MSH5-211ENST00000463144 TMPRSS2O15393 492 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 SIAH2O43255 324 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 CD5P06127 495 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 CAMLGP49069 296 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 TAS2R30P59541 319 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 ERVFRD-1P60508 538 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 C10orf91Q5T1B1 145 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 STX12Q86Y82 276 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 ZNF439Q8NDP4 499 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 OR2G3Q8NGZ4 309 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 SUN5Q8TC36 379 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 LRRC46Q96FV0 321 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 LINC00574Q9H8X3 128 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 TREM1Q9NP99 234 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.38□□□□□ -1.07
MSH5-211ENST00000463144 C19orf12Q9NSK7 152 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 UQCC1Q9NVA1 299 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 PPIAL4EA0A075B759 164 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 PPIAL4DF5H284 164 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 RNASEK-C17orf49H0YIS7 233 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 FCGR3BO75015 233 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 ATG12O94817 140 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 PPIAL4FP0DN26 164 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 CHRNB4P30926 498 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 RAB5CP51148 216 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 DEFA5Q01523 94 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 ZNF616Q08AN1 781 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 SPANXN5Q5MJ07 72 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.38□□□□□ -1.07
MSH5-211ENST00000463144 FAM216AQ8WUB2 273 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 ZCCHC14Q8WYQ9 949 aaKnown RBP8.38□□□□□ -1.07
MSH5-211ENST00000463144 CCL17Q92583 94 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 R3HDM4Q96D70 268 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 ZNF251Q9BRH9 671 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 EGLN1Q9GZT9 426 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 IDI2-AS1Q9NZ38 188 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 GAB2Q9UQC2 676 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 STRAPQ9Y3F4 350 aaKnown RBP8.38□□□□□ -1.07
MSH5-211ENST00000463144 PPIAL4AQ9Y536 164 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 HCFC1P51610 2035 aa8.38□□□□□ -1.07
MSH5-211ENST00000463144 YLPM1P49750 1951 aaKnown RBP8.38□□□□□ -1.07
MSH5-211ENST00000463144 ARFGEF3Q5TH69 2177 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 TRAV38-1A0A0B4J264 116 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 MARCH11A6NNE9 402 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 VSTM5A8MXK1 200 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 FAM157AC9JC47 383 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 PRH1P02810 166 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 CD3EP07766 207 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 OR9G9P0C7N8 305 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 NDUFB7P17568 137 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 NFYBP25208 207 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 APOBEC3AP31941 199 aaPredicted RBP8.37□□□□□ -1.07
MSH5-211ENST00000463144 SNCAP37840 140 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 GUCA2BQ16661 112 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 LYPD2Q6UXB3 125 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 H2BFWTQ7Z2G1 175 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 ZNF525Q8N782 197 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 CD300LFQ8TDQ1 290 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 DDB2Q92466 427 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 RBMXL1Q96E39 390 aaKnown RBP8.37□□□□□ -1.07
MSH5-211ENST00000463144 TMEM106BQ9NUM4 274 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 ZNF729A6NN14 1252 aaPredicted RBP8.37□□□□□ -1.07
MSH5-211ENST00000463144 ZG16O60844 167 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 TSPAN15O95858 294 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 ZNF273Q14593 569 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 PRAMEF5Q5TYX0 476 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 TMEM14EPQ6UXP3 125 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 ZDHHC16Q969W1 377 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 OR4C12Q96R67 309 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 SLC25A10Q9UBX3 287 aaPredicted RBP8.37□□□□□ -1.07
MSH5-211ENST00000463144 LAMP3Q9UQV4 416 aa8.37□□□□□ -1.07
MSH5-211ENST00000463144 PKDREJQ9NTG1 2253 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 ATRXP46100 2492 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 SAA2-SAA4A0A096LPE2 208 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 F8W036 122 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 TRIM77I1YAP6 450 aa8.36□□□□□ -1.07
MSH5-211ENST00000463144 DFFBO76075 338 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms