RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 SCARB1Q8WTV0 552 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 ST8SIA2Q92186 375 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 LSM10Q969L4 123 aaKnown RBP3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 GPR146Q96CH1 333 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 PIMREGQ9BSJ6 248 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 SSBP3Q9BWW4 388 aaPredicted RBP3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 CLEC7AQ9BXN2 247 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 GSX2Q9BZM3 304 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 COMMD5Q9GZQ3 224 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 PSENENQ9NZ42 101 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 OR5AC2Q9NZP5 309 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 STRAPQ9Y3F4 350 aaKnown RBP3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 CFAP54Q96N23 3096 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 DMXL1Q9Y485 3027 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 LRRK2Q5S007 2527 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 CHST1O43916 411 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 CST7O76096 145 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 LY86O95711 162 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 P2RY1P47900 373 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 ARF6P62330 175 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 EXOSC2Q13868 293 aaKnown RBP3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 DAZAP2Q15038 168 aaPredicted RBP3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 TMEM155Q4W5P6 130 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 CXorf66Q5JRM2 361 aaPredicted RBP3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 AKR1C8PQ5T2L2 129 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 WDR25Q64LD2 544 aaPredicted RBP3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 TMEM200BQ69YZ2 307 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 OR8G2PQ6IF36 304 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 TEX261Q6UWH6 196 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 FGFRL1Q8N441 504 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 HSD17B11Q8NBQ5 300 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 VSTM2AQ8TAG5 236 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 C18orf12Q96KH6 178 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 RHOVQ96L33 236 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 HARBI1Q96MB7 349 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 TMEM204Q9BSN7 226 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 LPAR2Q9HBW0 351 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 FBXL17Q9UF56 701 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 U3KQ87 197 aa3.41□□□□□ -1.86
ATP13A3-206ENST00000461660 TRAV14DV4A0A0A6YYC5 116 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 A0A1W2PRD5 423 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 A0A1W2PRF3 423 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 A0A1W2PRM7 423 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 FAM24AA6NFZ4 105 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 DBX1A6NMT0 343 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 C17orf98A8MV24 154 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 C15orf65H3BRN8 121 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 FOXH1O75593 365 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 DEDDO75618 318 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 SCAF4O95104 1147 aaKnown RBP3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 CAMLGP49069 296 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 OR2B8PP59922 312 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 RAB11AP62491 216 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 TAGLNQ01995 201 aaKnown RBP3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 ZNF616Q08AN1 781 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 IZUMO4Q1ZYL8 232 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 MST1LQ2TV78 715 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 NCR3LG1Q68D85 454 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 DHRS7BQ6IAN0 325 aaPredicted RBP3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 DTX2Q86UW9 622 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 IQCF2Q8IXL9 164 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 LHFPL5Q8TAF8 219 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 LRRC20Q8TCA0 184 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 TMED6Q8WW62 240 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 TMEM186Q96B77 213 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 FLYWCH2Q96CP2 140 aaKnown RBP3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 ZNF251Q9BRH9 671 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 PATZ1Q9HBE1 687 aaKnown RBP3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 FAM212BQ9NTI7 297 aaPredicted RBP3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 KAAG1Q9UBP8 84 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 INSIG2Q9Y5U4 225 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 KLF2Q9Y5W3 355 aaPredicted RBP3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 WNK2Q9Y3S1 2297 aa3.4□□□□□ -1.86
ATP13A3-206ENST00000461660 SAA2-SAA4A0A096LPE2 208 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 MARCH11A6NNE9 402 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 ZNF705EA8MWA4 302 aaPredicted RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 ITGB1BP1O14713 200 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 RGS13O14921 159 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 RBFOX2O43251 390 aaKnown RBP eCLIP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 SIAH2O43255 324 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 GAPDHP04406 335 aaKnown RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 FGF2P09038 288 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 OR8U8P0C7N1 319 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 SAA2P0DJI9 122 aaPredicted RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 MMP9P14780 707 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 LOXP28300 417 aaPredicted RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 MC5RP33032 325 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 PAX5Q02548 391 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 TLE4Q04727 773 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 RAB31Q13636 194 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 Q6ZPA2 131 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 OR10P1Q8NGE3 313 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 PCNPQ8WW12 178 aaKnown RBP3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 FAM168AQ92567 244 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 CORO2AQ92828 525 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 AQP10Q96PS8 301 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 PCGF1Q9BSM1 259 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 TMEM133Q9H2Q1 129 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 PLEKHA3Q9HB20 300 aa3.4□□□□□ -1.87
ATP13A3-206ENST00000461660 SIRT7Q9NRC8 400 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms