RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 FOXJ2Q9P0K8 574 aa13.08□□□□□ -0.32
SSR4-206ENST00000460616 FER1L5A0AVI2 2057 aa13.08□□□□□ -0.32
SSR4-206ENST00000460616 IGHV5-10-1A0A0J9YXX1 117 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 PGPEP1LA6NFU8 196 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 TRAPPC2LH3BP13 241 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 CBR3O75828 277 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 TRAPPC6AO75865 159 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 KRASP01116 189 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 LHX2P50458 406 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 MMDQ15546 238 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 ZNF709Q8N972 641 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 DERL1Q9BUN8 251 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 CEP250Q9BV73 2442 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 C20orf202A1L168 122 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 FAM90A26D6RGX4 464 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 KITLGP21583 273 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 NTF4P34130 210 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 DUSP3P51452 185 aaPredicted RBP13.07□□□□□ -0.32
SSR4-206ENST00000460616 MKXQ8IYA7 352 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 SAXO1Q8IYX7 474 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 FGFRL1Q8N441 504 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 ZNF114Q8NC26 417 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 CPT1CQ8TCG5 803 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 PSMF1Q92530 271 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 CCDC74BQ96LY2 380 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 SAMD10Q9BYL1 202 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 OR1A1Q9P1Q5 309 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 WIPI2Q9Y4P8 454 aa13.07□□□□□ -0.32
SSR4-206ENST00000460616 RBM7Q9Y580 266 aaKnown RBP13.07□□□□□ -0.32
SSR4-206ENST00000460616 CNOT1A5YKK6 2376 aaKnown RBP13.07□□□□□ -0.32
SSR4-206ENST00000460616 PTPRZ1P23471 2315 aaPredicted RBP13.07□□□□□ -0.32
SSR4-206ENST00000460616 A0A0J9YW62 118 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 MDFIC2A0A1B0GVS7 189 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 DEFA4P12838 97 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 UBE2G2P60604 165 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 BAGE3Q86Y29 109 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 OR5P3Q8WZ94 311 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 RDH5Q92781 318 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 SPSB4Q96A44 273 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 SGCZQ96LD1 299 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 ALKBH3Q96Q83 286 aaPredicted RBP13.06□□□□□ -0.32
SSR4-206ENST00000460616 NTN3O00634 580 aaPredicted RBP13.06□□□□□ -0.32
SSR4-206ENST00000460616 RBFOX2O43251 390 aaKnown RBP eCLIP13.06□□□□□ -0.32
SSR4-206ENST00000460616 DKK1O94907 266 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 BMP5P22003 454 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 CBLN1P23435 193 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 TFF3Q07654 80 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 DEFB124Q8NES8 71 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 NPCDR1Q9BY65 106 aa13.06□□□□□ -0.32
SSR4-206ENST00000460616 LIN7CQ9NUP9 197 aaKnown RBP13.06□□□□□ -0.32
SSR4-206ENST00000460616 F6UZH7 168 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 ATP5G3P48201 142 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 COMPP49747 757 aaPredicted RBP13.05□□□□□ -0.32
SSR4-206ENST00000460616 PCBD1P61457 104 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 OR10P1Q8NGE3 313 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 OR56B2PQ8NGI1 322 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 OR1L1Q8NH94 360 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 SRXN1Q9BYN0 137 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 FGF23Q9GZV9 251 aaPredicted RBP13.05□□□□□ -0.32
SSR4-206ENST00000460616 PPIAL4AQ9Y536 164 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 ZIC3O60481 467 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 CDC34P49427 236 aaPredicted RBP13.05□□□□□ -0.32
SSR4-206ENST00000460616 PIP4P1Q86T03 277 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 OR4B1Q8NGF8 309 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 OR6C1Q96RD1 312 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 FOXB1Q99853 325 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 C1QTNF5Q9BXJ0 243 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 MRPL18Q9H0U6 180 aaKnown RBP13.05□□□□□ -0.32
SSR4-206ENST00000460616 KCNS2Q9ULS6 477 aa13.05□□□□□ -0.32
SSR4-206ENST00000460616 TRBV6-6A0A0A6YYG2 114 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 WDR1O75083 606 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 ZNF90Q03938 601 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 OR5A2Q8NGI9 324 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 SF3B5Q9BWJ5 86 aaKnown RBP13.04□□□□□ -0.32
SSR4-206ENST00000460616 KCNIP2Q9NS61 270 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 CNTRLQ7Z7A1 2325 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 ARHGAP21Q5T5U3 1957 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.04□□□□□ -0.32
SSR4-206ENST00000460616 PTTG1IPP53801 180 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 DSCR4P56555 118 aaPredicted RBP13.04□□□□□ -0.32
SSR4-206ENST00000460616 COTL1Q14019 142 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 CEACAM16Q2WEN9 425 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 CEACAM21Q3KPI0 293 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 KMT5CQ86Y97 462 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 SIGLECL1Q8N7X8 197 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 STPG4Q8N801 248 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 RNASE8Q8TDE3 154 aaKnown RBP13.04□□□□□ -0.32
SSR4-206ENST00000460616 CLN8Q9UBY8 286 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 HSPB7Q9UBY9 170 aa13.04□□□□□ -0.32
SSR4-206ENST00000460616 TIAF1O95411 115 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 SERPINA7P05543 415 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 KRTDAPP60985 99 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 RPS16P62249 146 aaKnown RBP13.03□□□□□ -0.32
SSR4-206ENST00000460616 RBX1P62877 108 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 SAPCD1Q5SSQ6 148 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 AAED1Q7RTV5 226 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 OR10G8Q8NGN5 311 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 FAM103A1Q9BTL3 118 aaKnown RBP13.03□□□□□ -0.32
SSR4-206ENST00000460616 CRIM1Q9NZV1 1036 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms