RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 TMEM41BQ5BJD5 291 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 SAXO1Q8IYX7 474 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 LSM10Q969L4 123 aaKnown RBP13.3□□□□□ -0.28
CMTM3-203ENST00000460097 OR5B12Q96R08 314 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 IMMP2LQ96T52 175 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 MAGT1Q9H0U3 335 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 OPN3Q9H1Y3 402 aaPredicted RBP13.3□□□□□ -0.28
CMTM3-203ENST00000460097 TAAR3PQ9P1P4 343 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 PRSS50Q9UI38 385 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 ADGRG4Q8IZF6 3080 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 DOPEY2Q9Y3R5 2298 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 MDH2P40926 338 aaKnown RBP13.3□□□□□ -0.28
CMTM3-203ENST00000460097 ERVFC1-1P60608 527 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 LCN2P80188 198 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 TFF3Q07654 80 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 LRRC75BQ2VPJ9 315 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 DMRTC1Q5HYR2 192 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 C20orf196Q8IYI0 205 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 GPR137CQ8N3F9 429 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 TMEM217Q8N7C4 229 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 RIMS4Q9H426 269 aaPredicted RBP13.3□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF665Q9H7R5 613 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF581Q9P0T4 197 aa13.3□□□□□ -0.28
CMTM3-203ENST00000460097 TRBV6-6A0A0A6YYG2 114 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 KIR2DL5BA0A0G2JN68 375 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 KIR2DL5BA0A0G2JPC4 375 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 OR6C6A6NF89 314 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 M0R143 59 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 MRPL33O75394 65 aaKnown RBP13.29□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF205O95201 554 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 VENTXO95231 258 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 HRASP01112 189 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF726P1Q15940 193 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 FBXL19-AS1Q494R0 122 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 PHYHD1Q5SRE7 291 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF818PQ6ZRF7 136 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 KIR2DL5AQ8N109 375 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 GAPTQ8N292 157 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 OR1F12Q8NHA8 337 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 RNASE6Q93091 150 aaKnown RBP13.29□□□□□ -0.28
CMTM3-203ENST00000460097 RBM24Q9BX46 236 aaKnown RBP13.29□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF442Q9H7R0 627 aa13.29□□□□□ -0.28
CMTM3-203ENST00000460097 USP9YO00507 2555 aaPredicted RBP13.28□□□□□ -0.28
CMTM3-203ENST00000460097 hCG_38984A0A1B0GV85 526 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 TMEM210A6NLX4 147 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 ZFP92A6NM28 416 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 CNOT4O95628 575 aaKnown RBP13.28□□□□□ -0.28
CMTM3-203ENST00000460097 HBG1P69891 147 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 HBG2P69892 147 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF92Q03936 586 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 GAGE1Q13065 139 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 DAZAP2Q15038 168 aaPredicted RBP13.28□□□□□ -0.28
CMTM3-203ENST00000460097 BSXQ3C1V8 233 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 C1orf194Q5T5A4 169 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 SLC25A24Q6NUK1 477 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF880Q6PDB4 577 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF474Q6S9Z5 364 aaPredicted RBP13.28□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF295-AS1Q8N0V1 137 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF525Q8N782 197 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 DYRK2Q92630 601 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 ICE1Q9Y2F5 2266 aa13.28□□□□□ -0.28
CMTM3-203ENST00000460097 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
CMTM3-203ENST00000460097 FAM221AA4D161 298 aa13.27□□□□□ -0.28
CMTM3-203ENST00000460097 H7BYZ3 331 aa13.27□□□□□ -0.28
CMTM3-203ENST00000460097 GRNP28799 593 aaKnown RBP13.27□□□□□ -0.28
CMTM3-203ENST00000460097 NTF4P34130 210 aa13.27□□□□□ -0.28
CMTM3-203ENST00000460097 BTNL3Q6UXE8 466 aa13.27□□□□□ -0.28
CMTM3-203ENST00000460097 C16orf82Q7Z2V1 217 aa13.27□□□□□ -0.28
CMTM3-203ENST00000460097 ZIC4Q8N9L1 334 aa13.27□□□□□ -0.28
CMTM3-203ENST00000460097 ZNF385AQ96PM9 386 aaKnown RBP13.27□□□□□ -0.28
CMTM3-203ENST00000460097 SMIM7Q9BQ49 75 aa13.27□□□□□ -0.28
CMTM3-203ENST00000460097 UTP20O75691 2785 aaKnown RBP13.27□□□□□ -0.29
CMTM3-203ENST00000460097 ZNF816-ZNF321PA0A0X1KG74 233 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 C19orf84I3L1E1 186 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 CD99P14209 185 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 F2RP25116 425 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 GALR1P47211 349 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 MEF2BQ02080 365 aaPredicted RBP13.27□□□□□ -0.29
CMTM3-203ENST00000460097 PAX5Q02548 391 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 SPIN3Q5JUX0 258 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 ZNF66Q6ZN08 573 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 AAED1Q7RTV5 226 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 SPSB4Q96A44 273 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 TMEM45BQ96B21 275 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 APH1AQ96BI3 265 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 ULBP2Q9BZM5 246 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 ELOVL5Q9NYP7 299 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 OR6C3Q9NZP0 311 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 LAMP3Q9UQV4 416 aa13.27□□□□□ -0.29
CMTM3-203ENST00000460097 BAHCC1Q9P281 2608 aa13.26□□□□□ -0.29
CMTM3-203ENST00000460097 MAP1LC3B2A6NCE7 125 aa13.26□□□□□ -0.29
CMTM3-203ENST00000460097 CEBPZOSA8MTT3 80 aa13.26□□□□□ -0.29
CMTM3-203ENST00000460097 PGLYRP1O75594 196 aaPredicted RBP13.26□□□□□ -0.29
CMTM3-203ENST00000460097 SNRPCP09234 159 aaKnown RBP13.26□□□□□ -0.29
CMTM3-203ENST00000460097 RPL23P62829 140 aaKnown RBP13.26□□□□□ -0.29
CMTM3-203ENST00000460097 MAP1LC3BQ9GZQ8 125 aa13.26□□□□□ -0.29
CMTM3-203ENST00000460097 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
CMTM3-203ENST00000460097 GAB2Q9UQC2 676 aa13.26□□□□□ -0.29
CMTM3-203ENST00000460097 ATP23Q9Y6H3 246 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms