RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 MPZL2O60487 215 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 MRPS14O60783 128 aaKnown RBP0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 CRPP02741 224 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 GP1BAP07359 652 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 CCR7P32248 378 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 RPL27AP46776 148 aaKnown RBP0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 GABRA2P47869 451 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 CLEC12BQ2HXU8 276 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 Q3ZCU0 254 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 MESTQ5EB52 335 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 SPATA31B1PQ5VZV4 182 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 SPATA12Q7Z6I5 190 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 DAND5Q8N907 189 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 OR51T1Q8NGJ9 327 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 CYTH2Q99418 400 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 SIKE1Q9BRV8 207 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 TMEM208Q9BTX3 173 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 DOHHQ9BU89 302 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 TMEM222Q9H0R3 208 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 VCX3BQ9H321 246 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 CST9LQ9H4G1 147 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 MED9Q9NWA0 146 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 TAAR3PQ9P1P4 343 aa0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 KLK5Q9Y337 293 aaPredicted RBP0.56□□□□□ -2.32
SCARNA18-201ENST00000459004 PLA2G10O15496 165 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 KLRC4O43908 158 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 SERPINA7P05543 415 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 S100A9P06702 114 aaKnown RBP0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 PVALBP20472 110 aaPredicted RBP0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 IFNGR2P38484 337 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 H2BFSP57053 126 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 PLCXD2Q0VAA5 305 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 TMEM267Q0VDI3 215 aaPredicted RBP0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 LGALS9BQ3B8N2 356 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 SLC36A2Q495M3 483 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 LCN8Q6JVE9 175 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 LYZL1Q6UWQ5 148 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 ATP5L2Q7Z4Y8 100 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 BAP18Q8IXM2 172 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 LRRC34Q8IZ02 419 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 OR52E4Q8NGH9 312 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 RNASEH2CQ8TDP1 164 aaKnown RBP0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 SLC7A6Q92536 515 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 MS4A6EQ96DS6 147 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 ASCL3Q9NQ33 180 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 EMC3Q9P0I2 261 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 COL6A6A6NMZ7 2263 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 DSCAMO60469 2012 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 MED13Q9UHV7 2174 aa0.55□□□□□ -2.32
SCARNA18-201ENST00000459004 DICER1Q9UPY3 1922 aaKnown RBP0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 A0A087WUU8 490 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 IGKV2D-26A0A0A0MRZ7 120 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 TRAV8-1A0A0A6YYK1 113 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 GOLGA8QA0A0J9YX86 632 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 CIAO1O76071 339 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 CD79BP40259 229 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 EMP1P54849 157 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 SNAP25P60880 206 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 HOXC5Q00444 222 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 FP248Q71RG6 208 aaPredicted RBP0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 RPS19BP1Q86WX3 136 aaKnown RBP0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 OR1L8Q8NGR8 309 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 OR5AK3PQ8NH89 298 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 MBD3L1Q8WWY6 194 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 POLR3HQ9Y535 204 aaPredicted RBP0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 MALRD1Q5VYJ5 2156 aa0.54□□□□□ -2.32
SCARNA18-201ENST00000459004 HMSDA8MTL9 139 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 GOLGA8RI6L899 631 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 M0R381 172 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 PRB4P10163 310 aaPredicted RBP0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 PSMB8P28062 276 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 CCR2P41597 374 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 CDK9P50750 372 aaKnown RBP0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 TBPL1P62380 186 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 CTAG1AP78358 180 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 C7orf65Q6ZTY9 151 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 C1orf174Q8IYL3 243 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 ATP6V1C2Q8NEY4 427 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 STOML3Q8TAV4 291 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 Q8WTZ3 238 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 RNASE6Q93091 150 aaKnown RBP0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 SFRP2Q96HF1 295 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 NMNAT3Q96T66 252 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 ADAT1Q9BUB4 502 aaKnown RBP0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 METTL9Q9H1A3 318 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 AGPAT3Q9NRZ7 376 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 PARVAQ9NVD7 372 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 DLG5Q8TDM6 1919 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 MYH11P35749 1972 aa0.53□□□□□ -2.32
SCARNA18-201ENST00000459004 CPAMD8Q8IZJ3 1885 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 DAPL1A0PJW8 107 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 MT-CO2P00403 227 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 ATP5G1P05496 136 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 RPSAP08865 295 aaKnown RBP0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 LINC00614P0C842 121 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 F8A1P23610 371 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 ALDH3A1P30838 453 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 CA5AP35218 305 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 EVX1P49640 407 aa0.52□□□□□ -2.33
SCARNA18-201ENST00000459004 TMEM33P57088 247 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms