RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 TMEM116Q8NCL8 245 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 LRRC29Q8WV35 223 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 RBKSQ9H477 322 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 UQCR10Q9UDW1 63 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 A6NDN8 102 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 LRRC3CA6NJW4 275 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 LDLRAD4O15165 306 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 SMPD2O60906 423 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 PITX3O75364 302 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 CD1AP06126 327 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 SRSF9Q13242 221 aaKnown RBP eCLIP8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 IGFBP7Q16270 282 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 C1orf100Q5SVJ3 147 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 LEMD1Q68G75 181 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 PDPNQ86YL7 162 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 EIF4E3Q8N5X7 224 aaKnown RBP8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 CPEB3Q8NE35 698 aaKnown RBP8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 GPX7Q96SL4 187 aaPredicted RBP8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 SOSTQ9BQB4 213 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 WIPI2Q9Y4P8 454 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 DOCK11Q5JSL3 2073 aa8.41□□□□□ -1.06
MSC-AS1-201ENST00000457356 TICRRQ7Z2Z1 1910 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 LOC389332A0A1B0GUA5 103 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 RNF222A6NCQ9 220 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 A6NNC1 897 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 NTN3O00634 580 aaPredicted RBP8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 PLA2G5P39877 138 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 GLIPR1P48060 266 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 LYZP61626 148 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 RELBQ01201 579 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 VMA21Q3ZAQ7 101 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 PLA2G2CQ5R387 149 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 LINC01590Q5TEZ4 76 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 TGIF2LYQ8IUE0 185 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 OR4F17Q8NGA8 305 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 KLF2Q9Y5W3 355 aaPredicted RBP8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 PTPN13Q12923 2485 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 NLRC5Q86WI3 1866 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 TRAV38-1A0A0B4J264 116 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 A0A1W2PRD5 423 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 A0A1W2PRF3 423 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 A0A1W2PRM7 423 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 F5H697 171 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 CD8AP01732 235 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 CD1BP29016 333 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 PSMB2P49721 201 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 AESQ08117 197 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 TMEM97Q5BJF2 176 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 PPP1R32Q7Z5V6 425 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 RALYQ9UKM9 306 aaKnown RBP8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 C17orf51A8MQB3 221 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 FAM157AC9JC47 383 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 FXYD3Q14802 87 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 FDX2Q6P4F2 183 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 SGK494Q96LW2 274 aa8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 CARHSP1Q9Y2V2 147 aaKnown RBP8.4□□□□□ -1.06
MSC-AS1-201ENST00000457356 SPG11Q96JI7 2443 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 TRBV5-7A0A0A0MS05 114 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 IGHV1-45A0A0A0MS14 117 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 COLCA2A8K830 154 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 H3BVH4 76 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 UBE2CO00762 179 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 TBX6O95947 436 aaPredicted RBP8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 C1QTNF9P0C862 333 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 COX5BP10606 129 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 NPY1RP25929 384 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 UNC119Q13432 240 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 ERASQ7Z444 233 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 AQP3Q92482 292 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 TAF15Q92804 592 aaKnown RBP eCLIP8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 MRPL18Q9H0U6 180 aaKnown RBP8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 PARLQ9H300 379 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 FRMPD3Q5JV73 1810 aa8.4□□□□□ -1.07
MSC-AS1-201ENST00000457356 ISLRO14498 428 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 RAMP1O60894 148 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 HAND1O96004 215 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 ZNF83P51522 516 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 RPS23P62266 143 aaKnown RBP8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 EFNB1P98172 346 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 ROM1Q03395 351 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 KRTCAP3Q53RY4 240 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 OR4B1Q8NGF8 309 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 OR5A2Q8NGI9 324 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 WNT10AQ9GZT5 417 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 TMEM222Q9H0R3 208 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 IL19Q9UHD0 177 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 UFC1Q9Y3C8 167 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 IGHV3-21A0A0B4J1V1 117 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 NCBP2LA6PVI3 153 aaKnown RBP8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 CXorf1O96002 111 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 CDCP2Q5VXM1 449 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 TEPPQ6URK8 271 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 OR4X1Q8NH49 305 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 FAM216AQ8WUB2 273 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 DNAJC4Q9NNZ3 241 aa8.39□□□□□ -1.07
MSC-AS1-201ENST00000457356 MPC1Q9Y5U8 109 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms