RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SLC2A9Q9NRM0 540 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 PKDREJQ9NTG1 2253 aa13.26□□□□□ -0.29
SNX17-204ENST00000453453 IFNL4K9M1U5 179 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 YIF1AO95070 293 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 CLDN1O95832 211 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 RND2P52198 227 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 NDUFA6P56556 154 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 RND3P61587 244 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 Q3ZCU0 254 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 C6orf201Q7Z4U5 140 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 LYZL2Q7Z4W2 148 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 DTX2Q86UW9 622 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 HIST3H2BBQ8N257 126 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 ZCCHC24Q8N2G6 241 aaKnown RBP13.25□□□□□ -0.29
SNX17-204ENST00000453453 ZNF383Q8NA42 475 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 HSD17B11Q8NBQ5 300 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 OR2G3Q8NGZ4 309 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 OR5R1Q8NH85 324 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 RNASE11Q8TAA1 199 aaKnown RBP13.25□□□□□ -0.29
SNX17-204ENST00000453453 RCC1LQ96I51 464 aaKnown RBP13.25□□□□□ -0.29
SNX17-204ENST00000453453 PARP12Q9H0J9 701 aaKnown RBP13.25□□□□□ -0.29
SNX17-204ENST00000453453 HES4Q9HCC6 221 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 ARFGEF3Q5TH69 2177 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 CACNA1DQ01668 2161 aa13.25□□□□□ -0.29
SNX17-204ENST00000453453 SRRM5B3KS81 715 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 PDCD6O75340 191 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 SCAF4O95104 1147 aaKnown RBP13.24□□□□□ -0.29
SNX17-204ENST00000453453 PAX1P15863 534 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 FUT3P21217 361 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 ATP6V0CP27449 155 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 FHITP49789 147 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 SRSF7Q16629 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNX17-204ENST00000453453 SPRNQ5BIV9 151 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 ACP7Q6ZNF0 438 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 ZNF429Q86V71 674 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 FAM90A1Q86YD7 464 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 C1orf87Q8N0U7 546 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 Q8WTZ3 238 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 AK3Q9UIJ7 227 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 DYSFO75923 2080 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 TRDCB7Z8K6 153 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 TSTD3H0UI37 97 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 SH2D1BO14796 132 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 ICAM4Q14773 271 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 C11orf71Q6IPW1 123 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 Q6ZS49 121 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 TMEM56Q96MV1 263 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 LYRM2Q9NU23 88 aaPredicted RBP13.24□□□□□ -0.29
SNX17-204ENST00000453453 IL36RNQ9UBH0 155 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 LAMP3Q9UQV4 416 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 TMEM56-RWDD3S4R434 201 aa13.24□□□□□ -0.29
SNX17-204ENST00000453453 RAI1Q7Z5J4 1906 aaPredicted RBP13.23□□□□□ -0.29
SNX17-204ENST00000453453 TANC2Q9HCD6 1990 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 A0A1W2PPR1 153 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 FAM221AA4D161 298 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 WNT9BO14905 357 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 DEGS1O15121 323 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BKO60814 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 NDUFS6O75380 124 aaKnown RBP13.23□□□□□ -0.29
SNX17-204ENST00000453453 DIRAS3O95661 229 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BJP06899 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 SOD3P08294 240 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BOP23527 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BBP33778 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BDP58876 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 RAB4BP61018 213 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HERV-K104P61576 105 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BCP62807 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 DLK1P80370 383 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 NHLH2Q02577 135 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 ZNF146Q15072 292 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST2H2BEQ16778 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 C9orf152Q5JTZ5 239 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.23□□□□□ -0.29
SNX17-204ENST00000453453 C20orf204Q6ZNR8 217 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 STX12Q86Y82 276 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 GCSAMQ8N6F7 178 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BHQ93079 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BNQ99877 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 HIST1H2BMQ99879 126 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 OR14J1Q9UGF5 321 aa13.23□□□□□ -0.29
SNX17-204ENST00000453453 ST8SIA5O15466 376 aa13.22□□□□□ -0.29
SNX17-204ENST00000453453 NKX2-1P43699 371 aaPredicted RBP13.22□□□□□ -0.29
SNX17-204ENST00000453453 OR52M1Q8NGK5 317 aa13.22□□□□□ -0.29
SNX17-204ENST00000453453 NEK7Q8TDX7 302 aa13.22□□□□□ -0.29
SNX17-204ENST00000453453 NEU4Q8WWR8 484 aaPredicted RBP13.22□□□□□ -0.29
SNX17-204ENST00000453453 IL22RA2Q969J5 263 aa13.22□□□□□ -0.29
SNX17-204ENST00000453453 TOMM40LQ969M1 308 aa13.22□□□□□ -0.29
SNX17-204ENST00000453453 LIME1Q9H400 295 aa13.22□□□□□ -0.29
SNX17-204ENST00000453453 WSB1Q9Y6I7 421 aa13.22□□□□□ -0.29
SNX17-204ENST00000453453 IGHV1-69-2A0A0G2JMI3 117 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 DFFBO76075 338 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 HAND1O96004 215 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 CYB5R3P00387 301 aaPredicted RBP13.21□□□□□ -0.29
SNX17-204ENST00000453453 LHBP01229 141 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 CEACAM6P40199 344 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 HLA-DRB3P79483 266 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 PDCD1Q15116 288 aa13.21□□□□□ -0.29
SNX17-204ENST00000453453 AKR1C8PQ5T2L2 129 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms