RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 IGKV1D-39P04432 117 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 P0C879 139 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 IGKV1-13P0DP09 117 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 DRD1P21728 446 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 MSR1P21757 451 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 F2RP25116 425 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 GCH1P30793 250 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 NTSR1P30989 418 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 CAPZBP47756 277 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 FASLGP48023 281 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 GNG10P50151 68 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 RAB7AP51149 207 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 IDH3GP51553 393 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 ZNF41P51814 821 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 FOXG1P55316 489 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 RBM11P57052 281 aaKnown RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 OR1D5P58170 312 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 HERV-K104P61576 105 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 HOXA4Q00056 320 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 MYBPHQ13203 477 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 TRA2AQ13595 282 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 ADIRFQ15847 76 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 VWC2Q2TAL6 325 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 PLPPR5Q32ZL2 321 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 SNAI3Q3KNW1 292 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 MORN2Q502X0 79 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 TMEM31Q5JXX7 168 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 PHYHD1Q5SRE7 291 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 C1orf185Q5T7R7 199 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 ZNF324BQ6AW86 544 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 ACSM6Q6P461 480 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 KCNIP4Q6PIL6 250 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 ZNF705AQ6ZN79 300 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 LINC01551Q86U37 167 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 MCEMP1Q8IX19 187 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 C20orf196Q8IYI0 205 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 GAPTQ8N292 157 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 OSR2Q8N2R0 312 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 C17orf78Q8N4C9 275 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 Q8N7P7 452 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 SUMF1Q8NBK3 374 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 NFAM1Q8NET5 270 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 GJC3Q8NFK1 279 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 OR4B1Q8NGF8 309 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 OR10G8Q8NGN5 311 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 MRPL30Q8TCC3 161 aaKnown RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 C22orf15Q8WYQ4 148 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 OR5P3Q8WZ94 311 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 DYRK2Q92630 601 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 TAF15Q92804 592 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 THOC3Q96J01 351 aaKnown RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 WFIKKN1Q96NZ8 548 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 OR4C12Q96R67 309 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 GAL3ST4Q96RP7 486 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 PRSS22Q9GZN4 317 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 ZNF160Q9HCG1 818 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 DNAJC4Q9NNZ3 241 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 MANBALQ9NQG1 85 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 UBE2J1Q9Y385 318 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 NCOA6Q14686 2063 aaPredicted RBP3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 CENPFP49454 3210 aa3.46□□□□□ -1.86
HMGB3P22-202ENST00000451823 IGHV5-51A0A0C4DH38 117 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 TRBV11-1A0A0K0K1C0 115 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 SPTY2D1-AS1A0A0U1RR47 76 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 hCG_38984A0A1B0GV85 526 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 VSTM2BA6NLU5 285 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 A8MXE2 369 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 FAM90A26D6RGX4 464 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 F6UZH7 168 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 M0R135 149 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 SLC33A1O00400 549 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 SPRY1O43609 319 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 SYNGR2O43760 224 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 SYNGR3O43761 229 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 OR2J2O76002 312 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 NXPH3O95157 252 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 IGKV1-5P01602 117 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 CTXN2P0C2S0 81 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 IGLC2P0DOY2 106 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 IGLC3P0DOY3 106 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 HOXB2P14652 356 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 FKBP2P26885 142 aaKnown RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 CHRNB4P30926 498 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 CDKN1AP38936 164 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 FUT6P51993 359 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 FGF8P55075 233 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 CLDN15P56746 228 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 TPPP2P59282 170 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 GNB1P62873 340 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 RPP30P78346 268 aaKnown RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 MRPS34P82930 218 aaKnown RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 TMEM267Q0VDI3 215 aaPredicted RBP3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 UBE2V1Q13404 147 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 OR5I1Q13606 314 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 SHBQ15464 509 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 ATP6V1FQ16864 119 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 TMEM183BQ1AE95 376 aa3.45□□□□□ -1.86
HMGB3P22-202ENST00000451823 PIGYQ3MUY2 71 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms