RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 YPEL3P61236 119 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 RPS21P63220 83 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 POU3F1Q03052 451 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 C9orf50Q5SZB4 431 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SPATA46Q5T0L3 261 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SCD5Q86SK9 330 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 DRAM1Q8N682 238 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF784Q8NCA9 323 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 FAM222BQ8WU58 562 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 GPR146Q96CH1 333 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 C1QTNF4Q9BXJ3 329 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 AAMDCQ9H7C9 122 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PPIL1Q9Y3C6 166 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TSSC4Q9Y5U2 329 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 TMEM56-RWDD3S4R434 201 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SHROOM3Q8TF72 1996 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 FRG2CA6NGY1 282 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 HOXA3O43365 443 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 NDUFB4O95168 129 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TMEM50AO95807 157 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 MT-CO3P00414 261 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 THBDP07204 575 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 CCL2P13500 99 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PSG9Q00887 426 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF415Q09FC8 603 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 C17orf67Q0P5P2 114 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 MYBPHQ13203 477 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 KIR3DS1Q14943 382 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 KISS1Q15726 138 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZNF658BQ4V348 819 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 TEPPQ6URK8 271 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 THSD4Q6ZMP0 1018 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PNPLA5Q7Z6Z6 429 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 HMGN2P46Q86SG4 172 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 SAXO1Q8IYX7 474 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TPRX1Q8N7U7 411 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 OR4F17Q8NGA8 305 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 OR10AC1Q8NH08 325 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 RNASE8Q8TDE3 154 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 KLK6Q92876 244 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 RNF166Q96A37 237 aaPredicted RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 FMC1Q96HJ9 113 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TM2D1Q9BX74 207 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 TPSD1Q9BZJ3 242 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 DYNLRB1Q9NP97 96 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 STARD5Q9NSY2 213 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 HIF1ANQ9NWT6 349 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 DNAJB12Q9NXW2 375 aaKnown RBP1.91□□□□□ -2.1
USP53-202ENST00000450251 OBP2AQ9NY56 170 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 DEC1Q9P2X7 70 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ERG28Q9UKR5 140 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 RNF115Q9Y4L5 304 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 NEUROG3Q9Y4Z2 214 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 HS3ST3B1Q9Y662 390 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 PKD1L2Q7Z442 2459 aa1.91□□□□□ -2.1
USP53-202ENST00000450251 ZSWIM8A7E2V4 1837 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 TRIP11Q15643 1979 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 LOC107984156A0A0G2JMH3 177 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 TMEM30CPA0ZSE6 113 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 GRIFINA4D1Z8 144 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 C5orf49A4QMS7 147 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 FAM90A9PA6NNJ1 464 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 ZNF716A6NP11 495 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 KLF4O43474 513 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 FOXH1O75593 365 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 NKX2-2O95096 273 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 OR2H2O95918 312 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 TBX6O95947 436 aaPredicted RBP1.9□□□□□ -2.1
USP53-202ENST00000450251 TRACP01848 142 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 CRYGCP07315 174 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 ZNF688P0C7X2 276 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 VSIG8P0DPA2 414 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 CD46P15529 392 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 EVI2AP22794 236 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 CEACAM8P31997 349 aaPredicted RBP1.9□□□□□ -2.1
USP53-202ENST00000450251 ADCYAP1R1P41586 468 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 ZNF157P51786 506 aaPredicted RBP1.9□□□□□ -2.1
USP53-202ENST00000450251 CRYBA4P53673 196 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 DLX1P56177 255 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 ATXN8Q156A1 80 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 TMEM30BQ3MIR4 351 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 DEFB134Q4QY38 66 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 CCDC144NLQ6NUI1 221 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 ARL17AQ8IVW1 177 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 C10orf111Q8N326 155 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 IL1F10Q8WWZ1 152 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 IRF7Q92985 503 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 SLC25A28Q96A46 364 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 OXGR1Q96P68 337 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 HSD17B10Q99714 261 aaKnown RBP1.9□□□□□ -2.1
USP53-202ENST00000450251 WNT10AQ9GZT5 417 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 SIRT4Q9Y6E7 314 aaPredicted RBP1.9□□□□□ -2.1
USP53-202ENST00000450251 PTPRFP10586 1907 aa1.9□□□□□ -2.1
USP53-202ENST00000450251 GREB1LQ9C091 1923 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 A0A1W2PQD3 144 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 CDC42EP2O14613 210 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 SMAD7O15105 426 aaKnown RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 C1QCP02747 245 aa1.9□□□□□ -2.11
USP53-202ENST00000450251 CELA2BP08218 269 aaPredicted RBP1.9□□□□□ -2.11
USP53-202ENST00000450251 ASAH2BP0C7U1 165 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms