RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 COX6A1P12074 109 aa11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 HIST3H3Q16695 136 aa11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 PLCXD3Q63HM9 321 aa11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR11L1Q8NGX0 322 aa11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 MRPL30Q8TCC3 161 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 LIN37Q96GY3 246 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 HDHD3Q9BSH5 251 aaPredicted RBP11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 TMEM222Q9H0R3 208 aa11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 MCTS1Q9ULC4 181 aaKnown RBP11.46□□□□□ -0.58
SYNGAP1-204ENST00000449372 CORTO00230 105 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 NXPH3O95157 252 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 SERPINE2P07093 398 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 STAG3L3P0CL85 134 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 FAM27BQ5VT28 67 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 Q6ZSR3 168 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 WFDC12Q8WWY7 111 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 TMEM54Q969K7 222 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 PNRC2Q9NPJ4 139 aaKnown RBP11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 ZNF816-ZNF321PA0A0X1KG74 233 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 TMEM50AO95807 157 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 ACP1P24666 158 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 DUSP3P51452 185 aaPredicted RBP11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR1F12Q8NHA8 337 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 GAGE12BA1L429 117 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 SHISA8B8ZZ34 492 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 TMEM250H0YL14 139 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 PPYP01298 95 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 IGLV3-1P01715 115 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 SRSF7Q16629 238 aaKnown RBP eCLIP11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 ZNF468Q5VIY5 522 aaPredicted RBP11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR52L2PQ8NGH6 319 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 LHX4Q969G2 390 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 PROK2Q9HC23 129 aa11.45□□□□□ -0.58
SYNGAP1-204ENST00000449372 IGLC7A0M8Q6 106 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 ZNF891A8MT65 544 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR7C1O76099 320 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 GOSR1O95249 250 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 CELA2AP08217 269 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 WNT10AQ9GZT5 417 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 ODAMA1E959 279 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 TOX4O94842 621 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 CD99P14209 185 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 DSCR4P56555 118 aaPredicted RBP11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 FOXL2NBQ6ZUU3 175 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR4F5Q8NH21 305 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR4F4Q96R69 305 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 HS3ST1O14792 307 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 PSMB3P49720 205 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 TMEM144Q7Z5S9 345 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR2M7Q8NG81 312 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 RALGAPA1Q6GYQ0 2036 aa11.44□□□□□ -0.58
SYNGAP1-204ENST00000449372 IGHV2-26A0A0B4J1V2 119 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 M0R296 226 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 CHST1O43916 411 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 MDH2P40926 338 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 LHX2P50458 406 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 RRADP55042 308 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 C1QL2Q7Z5L3 287 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 REPIN1Q9BWE0 567 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 SERTM2A0A1B0GWG4 89 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 MKXQ8IYA7 352 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 SLC39A9Q9NUM3 307 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 F2Z2F3 143 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 SAP30O75446 220 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 GPX1P07203 203 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 ZNF883P0CG24 379 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 OTX1P32242 354 aaPredicted RBP11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 AMMECR1LQ6DCA0 310 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 SGMS2Q8NHU3 365 aa11.43□□□□□ -0.58
SYNGAP1-204ENST00000449372 WNT2P09544 360 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 YPEL3P61236 119 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 ELOVL5Q9NYP7 299 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 TBL2Q9Y4P3 447 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 CD300LBA8K4G0 201 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 ZNF253O75346 499 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 SLC25A6P12236 298 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 ZNF17P17021 662 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 ASCL4Q6XD76 172 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 PNKDQ8N490 385 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR5B3Q8NH48 314 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 CPT1CQ8TCG5 803 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 NRN1Q9NPD7 142 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 DOCK11Q5JSL3 2073 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 A0A1B0GV72 72 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 H3BP45 60 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 VENTXO95231 258 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 FOXL1Q12952 345 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 ACSF3Q4G176 576 aaPredicted RBP11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 LRRC10Q5BKY1 277 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 SELENOHQ8IZQ5 122 aaKnown RBP11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 ATOH7Q8N100 152 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 OR2Y1Q8NGV0 311 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 PIGCQ92535 297 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 KIAA1549Q9HCM3 1950 aa11.42□□□□□ -0.58
SYNGAP1-204ENST00000449372 DPRXA6NFQ7 191 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 ADAM20O43506 726 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 ANGPTL7O43827 346 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 CBLN1P23435 193 aa11.41□□□□□ -0.58
SYNGAP1-204ENST00000449372 SERF2P84101 59 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms