RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	PRRC2C	Q9Y520	2896 aa	Known RBP	14.12	□□□□□ -0.15
TOM1-210	ENST00000449058	TGIF2-C20orf24	A0A0A6YYL0	155 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	SPAAR	A0A1B0GVQ0	90 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	ADH4	P08319	380 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	PRDX2	P32119	198 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	MZT1	Q08AG7	82 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	KIAA0141	Q14154	515 aa	Predicted RBP	14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	VWC2	Q2TAL6	325 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058		Q3ZCU0	254 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	RFESD	Q8TAC1	157 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	LHX4	Q969G2	390 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	ZDHHC16	Q969W1	377 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	DCTN5	Q9BTE1	182 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	PSG11	Q9UQ72	335 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	URGCP-MRPS24	S4R325	110 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	INTS1	Q8N201	2190 aa	Known RBP	14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	CEBPZOS	A8MTT3	80 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	ST8SIA5	O15466	376 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	SPINT2	O43291	252 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	EIF2S3	P41091	472 aa	Known RBP	14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	RND2	P52198	227 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	BEND4	Q6ZU67	534 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	BHLHA15	Q7RTS1	189 aa	Predicted RBP	14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	PROCR	Q9UNN8	238 aa		14.11	□□□□□ -0.15
TOM1-210	ENST00000449058	CLN5	O75503	358 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	CYB5R3	P00387	301 aa	Predicted RBP	14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	EGR1	P18146	543 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	LINC00205	P59089	165 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	OR10P1	Q8NGE3	313 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	ZNF251	Q9BRH9	671 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	SLC25A15	Q9Y619	301 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	DEFB108A	A8MXU0	73 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	SRRM5	B3KS81	715 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	MDK	P21741	143 aa	Predicted RBP	14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	WDR25	Q64LD2	544 aa	Predicted RBP	14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	PARD6A	Q9NPB6	346 aa		14.1	□□□□□ -0.15
TOM1-210	ENST00000449058	IGKV1D-17	A0A075B6S4	117 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	MARCH11	A6NNE9	402 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	MB	P02144	154 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	HOXA5	P20719	270 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	FGF7	P21781	194 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	CD81	P60033	236 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	MSMP	Q1L6U9	139 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	ZNF674	Q2M3X9	581 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	SEM1	Q6ZVN7	128 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	OR2Z1	Q8NG97	314 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	WASF3	Q9UPY6	502 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	HEATR1	Q9H583	2144 aa	Known RBP	14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	CTXND1	A0A1B0GTU2	59 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	PROP1	O75360	226 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	CFHR2	P36980	270 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	GNB2	P62879	340 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	MEF2B	Q02080	365 aa	Predicted RBP	14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	AARD	Q4LEZ3	155 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	NCR3LG1	Q68D85	454 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	FAM180A	Q6UWF9	173 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	FAM90A1	Q86YD7	464 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	EDARADD	Q8WWZ3	215 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	DOCK11	Q5JSL3	2073 aa		14.09	□□□□□ -0.15
TOM1-210	ENST00000449058	MBD3L4	A6NDZ8	208 aa	Predicted RBP	14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	MBD3L3	A6NE82	208 aa	Predicted RBP	14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	MBD3L5	A6NJ08	208 aa	Predicted RBP	14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	CLDN34	H7C241	214 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	CEACAM4	O75871	244 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	GZMH	P20718	246 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	PLA2G5	P39877	138 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	TFF3	Q07654	80 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	EDDM3A	Q14507	147 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	CR1L	Q2VPA4	569 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	NCMAP	Q5T1S8	102 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	OR13D1	Q8NGV5	346 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	FAM216A	Q8WUB2	273 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	CYB5B	O43169	146 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	DUT	P33316	252 aa	Known RBP	14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	HNF4G	Q14541	408 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	DEFB109B	Q30KR1	87 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	OR10G9	Q8NGN4	311 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	OR10G7	Q8NGN6	311 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	R3HDM4	Q96D70	268 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	NPCDR1	Q9BY65	106 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	TMPRSS5	Q9H3S3	457 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	SLC25A22	Q9H936	323 aa		14.08	□□□□□ -0.16
TOM1-210	ENST00000449058	GPR12	P47775	334 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	FFAR4	Q5NUL3	377 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	JPT1	Q9UK76	154 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	C15orf62	A8K5M9	175 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	MGST3	O14880	152 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	NDUFS6	O75380	124 aa	Known RBP	14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	MORN2	Q502X0	79 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	IGF2-AS	Q6U949	168 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	LRP11	Q86VZ4	500 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	SNX22	Q96L94	193 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	QTRT1	Q9BXR0	403 aa	Known RBP	14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	CTDSP1	Q9GZU7	261 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	DOK5	Q9P104	306 aa		14.07	□□□□□ -0.16
TOM1-210	ENST00000449058	FAM90A9P	A6NNJ1	464 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	RBMXL2	O75526	392 aa	Known RBP	14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	OR9G9	P0C7N8	305 aa		14.06	□□□□□ -0.16
TOM1-210	ENST00000449058	LTC4S	Q16873	150 aa		14.06	□□□□□ -0.16

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