RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NRSN2Q9GZP1 204 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 CTLA4P16410 223 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 CD27P26842 260 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 MMD2Q8IY49 270 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 CHAC1Q9BUX1 264 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 PRDM13Q9H4Q3 707 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 LAMTOR2Q9Y2Q5 125 aa7.81□□□□□ -1.16
NIPBL-202ENST00000448238 SIRT4Q9Y6E7 314 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-202ENST00000448238 TRAV2A0A0B4J234 112 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 RPL27AP46776 148 aaKnown RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 TCTN3Q6NUS6 607 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 FAM57AQ8TBR7 257 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 PGLYRP3Q96LB9 341 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 NHP2Q9NX24 153 aaKnown RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 NPPBP16860 134 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 DCAF10Q5QP82 559 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 LINC00518Q8N0U6 118 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 C12orf76Q8N812 135 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 SVIPQ8NHG7 77 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 C16orf52Q8NHV5 167 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 SLIRPQ9GZT3 109 aaKnown RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 FNDC4Q9H6D8 234 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 IGHV3-15A0A0B4J1V0 119 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 PPIAL4DF5H284 164 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 IFNL4K9M1U5 179 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 PRR35P0CG20 571 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 ERVK11-1P61568 191 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 TNFRSF19Q9NS68 423 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 DCCP43146 1447 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 DSPPQ9NZW4 1301 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 TARBP1Q13395 1621 aaKnown RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF729A6NN14 1252 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 FAM90A26D6RGX4 464 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 M0QZQ0 153 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 SSTR5P35346 364 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 TMEM50BP56557 158 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 DIP2AQ14689 1571 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 SHISA5Q8N114 240 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 SLC37A2Q8TED4 501 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 SDF2L1Q9HCN8 221 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 SLIT3O75094 1523 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 PFN3P60673 137 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 RPL8P62917 257 aaKnown RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 MESP2Q0VG99 397 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 MS4A6EQ96DS6 147 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 OTOGLQ3ZCN5 2332 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 hCG_38984A0A1B0GV85 526 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 DLL1O00548 723 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 C8orf88P0DMB2 117 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF124Q15973 351 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 LOXL4Q96JB6 756 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 C18orf15Q96N68 181 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 ZFPL1O95159 310 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 NDUFA3O95167 84 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 PEX11BO96011 259 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 CLEC2AQ6UVW9 174 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 WDTC1Q8N5D0 677 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 GATD1Q8NB37 220 aa7.8□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF385AQ96PM9 386 aaKnown RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 KLF16Q9BXK1 252 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-202ENST00000448238 IGHV3-43A0A0B4J1X8 118 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 TRAV5A0A0B4J249 113 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 PEX7O00628 323 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 KLF4O43474 513 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 IGHV3-43DP0DP04 118 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 EGR2P11161 476 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 RPL31P62899 125 aaKnown RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 FAM27D1Q5T7N8 215 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 CGB1A6NKQ9 187 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 ISG15P05161 165 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 NPPCP23582 126 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 HBDP02042 147 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 ZGLP1P0C6A0 271 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 RTP2Q5QGT7 225 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF479Q96JC4 524 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 CISD1Q9NZ45 108 aaKnown RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 OGG1O15527 345 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 C1SP09871 688 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 ARSAP15289 507 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 ZC3H3Q8IXZ2 948 aaKnown RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 PRR14Q9BWN1 585 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 GPR132Q9UNW8 380 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 LOC390937A0A1W2PQ73 354 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 GPR6P46095 362 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 DEFB109BQ30KR1 87 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 C2orf82Q6UX34 121 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 Q6ZSR9 355 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 WTIPA6NIX2 430 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 TGFAP01135 160 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 ORMDL2Q53FV1 153 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 HSPE1P61604 102 aaKnown RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 LSM6P62312 80 aaKnown RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 WDR38Q5JTN6 314 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 SLC25A38Q96DW6 304 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 SOSTQ9BQB4 213 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 SFXN3Q9BWM7 321 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 RNF7Q9UBF6 113 aa7.79□□□□□ -1.16
NIPBL-202ENST00000448238 SLC25A10Q9UBX3 287 aaPredicted RBP7.79□□□□□ -1.16
NIPBL-202ENST00000448238 NCOA6Q14686 2063 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms