RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 CNIH2Q6PI25 160 aa14.7□□□□□ -0.06
HDAC4-203ENST00000445704 RNF152Q8N8N0 203 aa14.7□□□□□ -0.06
HDAC4-203ENST00000445704 KLHL30-AS1Q8NEE0 82 aa14.7□□□□□ -0.06
HDAC4-203ENST00000445704 WFDC9Q8NEX5 89 aa14.7□□□□□ -0.06
HDAC4-203ENST00000445704 SLC25A46Q96AG3 418 aa14.7□□□□□ -0.06
HDAC4-203ENST00000445704 NAA50Q9GZZ1 169 aaKnown RBP14.7□□□□□ -0.06
HDAC4-203ENST00000445704 DIABLOQ9NR28 239 aa14.7□□□□□ -0.06
HDAC4-203ENST00000445704 TPSG1Q9NRR2 321 aa14.7□□□□□ -0.06
HDAC4-203ENST00000445704 METTL1Q9UBP6 276 aaKnown RBP14.7□□□□□ -0.06
HDAC4-203ENST00000445704 IGKV1D-13A0A0B4J2D9 117 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 NUDT19A8MXV4 375 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 ELANEP08246 267 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 CTXN2P0C2S0 81 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 IGKV1-13P0DP09 117 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 CD33P20138 364 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 PSMB8P28062 276 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 RPS16P62249 146 aaKnown RBP14.69□□□□□ -0.06
HDAC4-203ENST00000445704 CX3CL1P78423 397 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 PLGLAQ15195 96 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 CXorf66Q5JRM2 361 aaPredicted RBP14.69□□□□□ -0.06
HDAC4-203ENST00000445704 UBE2NLQ5JXB2 153 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 SAMD12Q8N8I0 201 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 CLCC1Q96S66 551 aa14.69□□□□□ -0.06
HDAC4-203ENST00000445704 TRAV41A0A0B4J266 112 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 LINC00473A8K010 186 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 IGLV2-23P01705 113 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 FCER2P06734 321 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 IGLL1P15814 213 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 DUTP33316 252 aaKnown RBP14.68□□□□□ -0.06
HDAC4-203ENST00000445704 THBS3P49746 956 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 PDLIM3Q53GG5 364 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-203ENST00000445704 C19orf54Q5BKX5 351 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 ZNF660Q6AZW8 331 aaPredicted RBP14.68□□□□□ -0.06
HDAC4-203ENST00000445704 HOGA1Q86XE5 327 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 ZNF695Q8IW36 515 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 LINC00482Q8N8I6 264 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 BVESQ8NE79 360 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 BEST4Q8NFU0 473 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 DDB2Q92466 427 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 FLYWCH2Q96CP2 140 aaKnown RBP14.68□□□□□ -0.06
HDAC4-203ENST00000445704 DUX3Q96PT4 197 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 TSNAXQ99598 290 aaKnown RBP14.68□□□□□ -0.06
HDAC4-203ENST00000445704 OR2W1Q9Y3N9 320 aa14.68□□□□□ -0.06
HDAC4-203ENST00000445704 MEIS3P1A6NDR6 274 aa14.67□□□□□ -0.06
HDAC4-203ENST00000445704 XRCC3O43542 346 aa14.67□□□□□ -0.06
HDAC4-203ENST00000445704 SLC25A17O43808 307 aa14.67□□□□□ -0.06
HDAC4-203ENST00000445704 SPDEFO95238 335 aa14.67□□□□□ -0.06
HDAC4-203ENST00000445704 HLA-DQB1P01920 261 aa14.67□□□□□ -0.06
HDAC4-203ENST00000445704 OR5H8P0DN80 308 aa14.67□□□□□ -0.06
HDAC4-203ENST00000445704 EGR2P11161 476 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-203ENST00000445704 LUMP51884 338 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-203ENST00000445704 CRIP2P52943 208 aaPredicted RBP14.67□□□□□ -0.06
HDAC4-203ENST00000445704 ECSCRQ19T08 205 aa14.67□□□□□ -0.06
HDAC4-203ENST00000445704 MRPL41Q8IXM3 137 aaKnown RBP14.67□□□□□ -0.06
HDAC4-203ENST00000445704 KLK15Q9H2R5 256 aa14.67□□□□□ -0.06
HDAC4-203ENST00000445704 SOX15O60248 233 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 TUSC2O75896 110 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 GABARAPO95166 117 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 CA2P00918 260 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 IGLV1-40P01703 118 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 IGLV2-14P01704 120 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 PRB2P02812 416 aaPredicted RBP14.66□□□□□ -0.06
HDAC4-203ENST00000445704 EIF4EP06730 217 aaKnown RBP14.66□□□□□ -0.06
HDAC4-203ENST00000445704 TAS2R20P59543 309 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 CTF1Q16619 201 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 DEFB136Q30KP8 78 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 ANKRD13BQ86YJ7 626 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 ZNF645Q8N7E2 425 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 MINDY2Q8NBR6 621 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 MYOZ3Q8TDC0 251 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 SNAPC3Q92966 411 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 KCTD12Q96CX2 325 aaKnown RBP14.66□□□□□ -0.06
HDAC4-203ENST00000445704 S100A16Q96FQ6 103 aaKnown RBP14.66□□□□□ -0.06
HDAC4-203ENST00000445704 RAX2Q96IS3 184 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 HARBI1Q96MB7 349 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 P2RX4Q99571 388 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 FAM103A1Q9BTL3 118 aaKnown RBP14.66□□□□□ -0.06
HDAC4-203ENST00000445704 MRPS26Q9BYN8 205 aaKnown RBP14.66□□□□□ -0.06
HDAC4-203ENST00000445704 A3GALT2U3KPV4 340 aa14.66□□□□□ -0.06
HDAC4-203ENST00000445704 CRYGBP07316 175 aa14.65□□□□□ -0.06
HDAC4-203ENST00000445704 SLC6A1P30531 599 aa14.65□□□□□ -0.06
HDAC4-203ENST00000445704 CDX1P47902 265 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-203ENST00000445704 ARPC4P59998 168 aa14.65□□□□□ -0.06
HDAC4-203ENST00000445704 SSBP2P81877 361 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-203ENST00000445704 KIAA0141Q14154 515 aaPredicted RBP14.65□□□□□ -0.06
HDAC4-203ENST00000445704 TMEM177Q53S58 311 aa14.65□□□□□ -0.06
HDAC4-203ENST00000445704 TMEM69Q5SWH9 247 aa14.65□□□□□ -0.06
HDAC4-203ENST00000445704 GPR107Q5VW38 600 aa14.65□□□□□ -0.06
HDAC4-203ENST00000445704 ADTRPQ96IZ2 230 aa14.65□□□□□ -0.06
HDAC4-203ENST00000445704 RBMX2Q9Y388 322 aaKnown RBP14.65□□□□□ -0.06
HDAC4-203ENST00000445704 NUBP2Q9Y5Y2 271 aa14.65□□□□□ -0.06
HDAC4-203ENST00000445704 A0A1W2PN81 502 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 SRRM4A7MD48 611 aaKnown RBP14.64□□□□□ -0.07
HDAC4-203ENST00000445704 ARPC1BO15143 372 aaKnown RBP14.64□□□□□ -0.07
HDAC4-203ENST00000445704 CHRNA7P36544 502 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 MYCNOSP40205 109 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 ALDH3B2P48448 385 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 RPL30P62888 115 aaKnown RBP14.64□□□□□ -0.07
HDAC4-203ENST00000445704 TAGLNQ01995 201 aaKnown RBP14.64□□□□□ -0.07
HDAC4-203ENST00000445704 PJVKQ0ZLH3 352 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms