RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PGLYRP4Q96LB8 373 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 PLXNB2O15031 1838 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 B4E171 279 aa16.07■□□□□ 0.16
SHANK3-203ENST00000445220 TRIP6Q15654 476 aaKnown RBP16.07■□□□□ 0.16
SHANK3-203ENST00000445220 TBL2Q9Y4P3 447 aaKnown RBP16.07■□□□□ 0.16
SHANK3-203ENST00000445220 S1PR2O95136 353 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 IGKV1D-16P01601 117 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 SAMD13Q5VXD3 122 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 WNT10AQ9GZT5 417 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 LAMTOR2Q9Y2Q5 125 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 FGFRL1Q8N441 504 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 HSPB7Q9UBY9 170 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 TPRP12270 2363 aaKnown RBP16.06■□□□□ 0.16
SHANK3-203ENST00000445220 NUDT3O95989 172 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 UCP3P55916 312 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 DTX4Q9Y2E6 619 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 SHANK3Q9BYB0 1731 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 FOXS1O43638 330 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 IFI6P09912 130 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 CSRP3P50461 194 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 Q5PR19 223 aa16.06■□□□□ 0.16
SHANK3-203ENST00000445220 IGLV1-36A0A0B4J1U3 117 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 STAG3L3P0CL85 134 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 GAB4Q2WGN9 574 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 TMEM177Q53S58 311 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 CCL17Q92583 94 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 MAP1LC3AQ9H492 121 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 RPRMQ9NS64 109 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 ANKRD31Q8N7Z5 1873 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 LMX1BO60663 402 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 IL4P05112 153 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 FAM27BQ5VT28 67 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 DOCK5Q9H7D0 1870 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 CRYBB3P26998 211 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 AMMECR1LQ6DCA0 310 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 PGPA6NDG6 321 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 NGFRP08138 427 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 NUBP1P53384 320 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 TNFRSF9Q07011 255 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 SRSF5Q13243 272 aaKnown RBP16.05■□□□□ 0.16
SHANK3-203ENST00000445220 SCNM1Q9BWG6 230 aa16.05■□□□□ 0.16
SHANK3-203ENST00000445220 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
SHANK3-203ENST00000445220 IGHV4-34P06331 123 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 UNC119Q13432 240 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 ST6GALNAC3Q8NDV1 305 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 TMEM52Q8NDY8 209 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 RCC1LQ96I51 464 aaKnown RBP16.04■□□□□ 0.16
SHANK3-203ENST00000445220 CEACAM18A8MTB9 384 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 TMEM108Q6UXF1 575 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 TMEM14DPA8MWL7 114 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 TRAV14DV4A0A0A6YYC5 116 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 A0A0G2JK05 382 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 GREM1O60565 184 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 JOSD1Q15040 202 aaPredicted RBP16.04■□□□□ 0.16
SHANK3-203ENST00000445220 RBPMS2Q6ZRY4 209 aaKnown RBP16.04■□□□□ 0.16
SHANK3-203ENST00000445220 BIVMQ86UB2 503 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 ZNF645Q8N7E2 425 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 UCN2Q96RP3 112 aa16.04■□□□□ 0.16
SHANK3-203ENST00000445220 IGHV5-10-1A0A0J9YXX1 117 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 CEACAM21Q3KPI0 293 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 FAM206AQ9NX38 181 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 SLC25A17O43808 307 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 ZNF324O75467 553 aaPredicted RBP16.03■□□□□ 0.16
SHANK3-203ENST00000445220 C8orf88P0DMB2 117 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 LGALS7P47929 136 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 OR2I1PQ8NGU4 316 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 FAM131CQ96AQ9 280 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 SOX21Q9Y651 276 aaPredicted RBP16.03■□□□□ 0.16
SHANK3-203ENST00000445220 TMPRSS2O15393 492 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 CA7P43166 264 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 TUSC5Q8IXB3 177 aa16.03■□□□□ 0.16
SHANK3-203ENST00000445220 FAM169BQ8N8A8 192 aa16.02■□□□□ 0.16
SHANK3-203ENST00000445220 ZNF488Q96MN9 340 aa16.02■□□□□ 0.16
SHANK3-203ENST00000445220 PRDM13Q9H4Q3 707 aa16.02■□□□□ 0.16
SHANK3-203ENST00000445220 POLR2AP24928 1970 aaKnown RBP16.02■□□□□ 0.16
SHANK3-203ENST00000445220 C9orf40Q8IXQ3 194 aa16.02■□□□□ 0.16
SHANK3-203ENST00000445220 ATAD5Q96QE3 1844 aa16.02■□□□□ 0.16
SHANK3-203ENST00000445220 SDF2L1Q9HCN8 221 aa16.02■□□□□ 0.15
SHANK3-203ENST00000445220 COA4Q9NYJ1 87 aa16.02■□□□□ 0.15
SHANK3-203ENST00000445220 IL36BQ9NZH7 164 aa16.02■□□□□ 0.15
SHANK3-203ENST00000445220 SPCS1Q9Y6A9 102 aa16.02■□□□□ 0.15
SHANK3-203ENST00000445220 FAM157AC9JC47 383 aa16.02■□□□□ 0.15
SHANK3-203ENST00000445220 CCL4P13236 92 aa16.02■□□□□ 0.15
SHANK3-203ENST00000445220 PRSS53Q2L4Q9 553 aa16.02■□□□□ 0.15
SHANK3-203ENST00000445220 DERL1Q9BUN8 251 aa16.02■□□□□ 0.15
SHANK3-203ENST00000445220 NDUFS8O00217 210 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 RAMP1O60894 148 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 TCF24Q7RTU0 167 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 ZNF721Q8TF20 911 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 CLDN14O95500 239 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 RNF7Q9UBF6 113 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 WDR90Q96KV7 1748 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 A0A1B0GWB2 263 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 LOC390937A0A1W2PQ73 354 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.01■□□□□ 0.15
SHANK3-203ENST00000445220 MOGAT3Q86VF5 341 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 Q96M66 194 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 KCNK17Q96T54 332 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 TRAV9-1A0A075B6T8 112 aa16.01■□□□□ 0.15
SHANK3-203ENST00000445220 C19orf67A6NJJ6 358 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms